RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CFIP05156 583 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 HNRNPKP61978 463 aaKnown RBP eCLIP8.89□□□□□ -0.993e-7■■□□□ 12.8
CDC42SE1-202ENST00000439374 INPP5JQ15735 1006 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 AWAT2Q6E213 333 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF529Q6P280 563 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF565Q8N9K5 539 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR4A4PQ8NGN8 299 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 PTPMT1Q8WUK0 201 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 NICN1Q9BSH3 213 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 COA4Q9NYJ1 87 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 PCDHGA1Q9Y5H4 931 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 RNF215Q9Y6U7 377 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 DNAJC13O75165 2243 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 TTC28Q96AY4 2481 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 TMED7-TICAM2A0A0A6YYA0 188 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 HMSDA8MTL9 139 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 GSTZ1O43708 216 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 GAAP10253 952 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 ALOX5APP20292 161 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 TUBG1P23258 451 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 ABCD3P28288 659 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 RAG2P55895 527 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 ACTBP60709 375 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 ACTG1P63261 375 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 RAB32Q13637 225 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 PDCD1Q15116 288 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF674Q2M3X9 581 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 MESTQ5EB52 335 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR2A2Q6IF42 318 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 PRSS35Q8N3Z0 413 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR14K1Q8NGZ2 314 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR1L3Q8NH93 324 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 DAZLQ92904 295 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 SUSD2Q9UGT4 822 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 RHBDD3Q9Y3P4 386 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF106Q9H2Y7 1883 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 IGKV1D-42A0A075B6H8 117 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 TEX13DA0A0J9YY54 714 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 A0A1W2PR80 420 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 TSPAN15O95858 294 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 KLK3P07288 261 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 HEXBP07686 556 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 QDPRP09417 244 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 PNMTP11086 282 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 RPA2P15927 270 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 MAPK3P27361 379 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 SGCAQ16586 387 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF600Q6ZNG1 722 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 MAMDC2Q7Z304 686 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 NUP54Q7Z3B4 507 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 WDSUB1Q8N9V3 476 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 THOC3Q96J01 351 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 ARL5BQ96KC2 179 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 NECAB3Q96P71 396 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 SLC19A3Q9BZV2 496 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 PTGES2Q9H7Z7 377 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 CHST11Q9NPF2 352 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 NBEAQ8NFP9 2946 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 PCDH15Q96QU1 1955 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 A0A1W2PNR3 127 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 PMS2P2O95744 297 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 IL5P05113 134 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 HCKP08631 526 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 PGCP20142 388 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 G0S2P27469 103 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 PSMB6P28072 239 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 LPAR6P43657 344 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 HAAOP46952 286 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 HSD17B7P56937 341 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 TLE3Q04726 772 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 TSPO2Q5TGU0 170 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 NAXDQ8IW45 347 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 PNLDC1Q8NA58 520 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR5AP2Q8NGF4 316 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR5M8Q8NGP6 311 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 METTL7AQ9H8H3 244 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 C2orf16Q68DN1 1984 aa8.88□□□□□ -0.99
CDC42SE1-202ENST00000439374 ICE1Q9Y2F5 2266 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 SHANK1Q9Y566 2161 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 LOC100289279A0A1B0GTE1 492 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 RNASEK-C17orf49H0YIS7 233 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 MASP2O00187 686 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 GPRIN2O60269 458 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 GDF9O60383 454 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 CTLA4P16410 223 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 SERPINA2P20848 420 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 PRTGQ2VWP7 1150 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF528Q3MIS6 628 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 UBAC2Q8NBM4 344 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 CLEC1AQ8NC01 280 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR5T1Q8NG75 326 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR4D6Q8NGJ1 314 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 SLC25A43Q8WUT9 341 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 RNF141Q8WVD5 230 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 GPHA2Q96T91 129 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 TNFSF18Q9UNG2 199 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 TMEM269A0A1B0GVZ9 245 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 TLCD2A6NGC4 264 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 RPS4Y1P22090 263 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms