RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 RBM4BQ9BQ04 359 aaKnown RBP20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 OR10A2Q9H208 303 aa20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 PCDHB10Q9UN67 800 aa20.85■□□□□ 0.93
RAPGEF1-206ENST00000438647 ALOX5APP20292 161 aa20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 CA6P23280 308 aa20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 CD200P41217 278 aa20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 C12orf73Q69YU5 71 aa20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 KCTD18Q6PI47 426 aaPredicted RBP20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 IL17RELQ6ZVW7 336 aa20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 FAM57BQ71RH2 274 aa20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 MOGAT3Q86VF5 341 aa20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 KLBQ86Z14 1044 aa20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 MUC20Q8N307 709 aaPredicted RBP20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 TCEANCQ8N8B7 351 aa20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 SPERTQ8NA61 448 aa20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 REEP6Q96HR9 211 aa20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 ADAT1Q9BUB4 502 aaKnown RBP20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 RGCCQ9H4X1 137 aa20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 TMEM14AQ9Y6G1 99 aa20.84■□□□□ 0.93
RAPGEF1-206ENST00000438647 CUBNO60494 3623 aa20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 C5orf63A6NC05 138 aa20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 SLC22A31A6NKX4 558 aa20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 IRF2P14316 349 aa20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 ANOS1P23352 680 aa20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 EPHA2P29317 976 aa20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 MDH2P40926 338 aaKnown RBP20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 MZT1Q08AG7 82 aa20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 NXNL2Q5VZ03 156 aa20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 PRSS45Q7RTY3 260 aa20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 LRRC28Q86X40 367 aaPredicted RBP20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 OR56B2PQ8NGI1 322 aa20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 ZNF420Q8TAQ5 688 aaPredicted RBP20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 TMEM163Q8TC26 289 aa20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 PGAM5Q96HS1 289 aa20.83■□□□□ 0.93
RAPGEF1-206ENST00000438647 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 CCDC182A6NF36 153 aa20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 SAC3D1A6NKF1 404 aa20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 THBS2P35442 1172 aa20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 SRP14P37108 136 aaKnown RBP20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 MAB21L1Q13394 359 aa20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 ZMYND11Q15326 602 aa20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 SNCBQ16143 134 aa20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 DEGS2Q6QHC5 323 aa20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 LRRN1Q6UXK5 716 aa20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 MEPCEQ7L2J0 689 aaKnown RBP20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 KRT77Q7Z794 578 aa20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 GID4Q8IVV7 300 aa20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 OR11L1Q8NGX0 322 aa20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 SGK3Q96BR1 496 aa20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 CNN2Q99439 309 aaKnown RBP20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 GABARAPL3Q9BY60 117 aa20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 BRD7Q9NPI1 651 aa20.82■□□□□ 0.92
RAPGEF1-206ENST00000438647 A0A0G2JMP0 313 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 A0A0X1KG70 313 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 ANKRD30BLA7E2S9 258 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 PLPP2O43688 288 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 MRPL3P09001 348 aaKnown RBP20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 PSMA6P60900 246 aaKnown RBP20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 EFNB1P98172 346 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 FAM3AP98173 230 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 ZNF771Q7L3S4 317 aaPredicted RBP20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 FTMTQ8N4E7 242 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 TEX29Q8N6K0 151 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 PLPP7Q8NBV4 271 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 OR4M2Q8NGB6 313 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 Q8TCH9 128 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 ASB17Q8WXJ9 295 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 RAB3IPQ96QF0 476 aaPredicted RBP20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 PKP2Q99959 881 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 MROQ9BYG7 248 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 ZNF391Q9UJN7 358 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 KLHDC2Q9Y2U9 406 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 LRP12Q9Y561 859 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 ORC6Q9Y5N6 252 aa20.81■□□□□ 0.92
RAPGEF1-206ENST00000438647 IGHV3-64DA0A0J9YX35 117 aa20.8■□□□□ 0.92
RAPGEF1-206ENST00000438647 FOXH1O75593 365 aa20.8■□□□□ 0.92
RAPGEF1-206ENST00000438647 FSTL3O95633 263 aa20.8■□□□□ 0.92
RAPGEF1-206ENST00000438647 CYB5R3P00387 301 aaPredicted RBP20.8■□□□□ 0.92
RAPGEF1-206ENST00000438647 PNPP00491 289 aa20.8■□□□□ 0.92
RAPGEF1-206ENST00000438647 CPT2P23786 658 aa20.8■□□□□ 0.92
RAPGEF1-206ENST00000438647 HNRNPA0Q13151 305 aaKnown RBP20.8■□□□□ 0.92
RAPGEF1-206ENST00000438647 GFOD2Q3B7J2 385 aa20.8■□□□□ 0.92
RAPGEF1-206ENST00000438647 AADACL4Q5VUY2 407 aa20.8■□□□□ 0.92
RAPGEF1-206ENST00000438647 IL4I1Q96RQ9 567 aa20.8■□□□□ 0.92
RAPGEF1-206ENST00000438647 MNTQ99583 582 aa20.8■□□□□ 0.92
RAPGEF1-206ENST00000438647 RIBC2Q9H4K1 309 aa20.8■□□□□ 0.92
RAPGEF1-206ENST00000438647 FN3KRPQ9HA64 309 aa20.8■□□□□ 0.92
RAPGEF1-206ENST00000438647 PATZ1Q9HBE1 687 aaKnown RBP20.8■□□□□ 0.92
RAPGEF1-206ENST00000438647 hCG_38984A0A1B0GV85 526 aa20.79■□□□□ 0.92
RAPGEF1-206ENST00000438647 M0R129 80 aa20.79■□□□□ 0.92
RAPGEF1-206ENST00000438647 GATA3P23771 443 aa20.79■□□□□ 0.92
RAPGEF1-206ENST00000438647 FAHD2BQ6P2I3 314 aaPredicted RBP20.79■□□□□ 0.92
RAPGEF1-206ENST00000438647 CSNK2A3Q8NEV1 391 aa20.79■□□□□ 0.92
RAPGEF1-206ENST00000438647 FAHD2AQ96GK7 314 aa20.79■□□□□ 0.92
RAPGEF1-206ENST00000438647 G6PC2Q9NQR9 355 aa20.79■□□□□ 0.92
RAPGEF1-206ENST00000438647 C14orf119Q9NWQ9 140 aa20.79■□□□□ 0.92
RAPGEF1-206ENST00000438647 ACOD1A6NK06 481 aa20.78■□□□□ 0.92
RAPGEF1-206ENST00000438647 H3BNX3 289 aa20.78■□□□□ 0.92
RAPGEF1-206ENST00000438647 PHYHO14832 338 aa20.78■□□□□ 0.92
RAPGEF1-206ENST00000438647 ZNF254O75437 659 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms