RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 GNPTGQ9UJJ9 305 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 CCDC144AA2RUR9 1427 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 CNTLNQ9NXG0 1405 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 KIF21BO75037 1637 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 MYH14Q7Z406 1995 aaKnown RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 CCNB3Q8WWL7 1395 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 CCDC88BA6NC98 1476 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 WDR7Q9Y4E6 1490 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 ARID2Q68CP9 1835 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 IGLV3-22A0A075B6J6 115 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 MEIOCA2RUB1 952 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 OR6C6A6NF89 314 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 LYRM9A8MSI8 78 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 TSTD3H0UI37 97 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 ZNF593O00488 134 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 KPNA4O00629 521 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 NME4O00746 187 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 FABP7O15540 132 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 SUPT3HO75486 399 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 SLC22A5O76082 557 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 PTTG1O95997 202 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 TOMM40O96008 361 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 PCCAP05165 728 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 CT45A6P0DMU7 189 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 CT45A5P0DMU8 189 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 CT45A7P0DMV0 189 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 ZNF250P15622 560 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 SDC1P18827 310 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 CALML3P27482 149 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 HTR1EP28566 365 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 RPL12P30050 165 aaKnown RBP2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 SLC6A1P30531 599 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 HRH1P35367 487 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 HOXA1P49639 335 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 UBE2E1P51965 193 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 CDH11P55287 796 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 LIM2P55344 173 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 PAX9P55771 341 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 MRPS11P82912 194 aaKnown RBP2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 ZNF235Q14590 738 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 TRIP13Q15645 432 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 LRRC26Q2I0M4 334 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 LRRC75BQ2VPJ9 315 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 HLA-DRB5Q30154 266 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 CEACAM21Q3KPI0 293 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 ZBED5Q49AG3 693 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 CT45A1Q5HYN5 189 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 GPRC6AQ5T6X5 926 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 ZFP1Q6P2D0 407 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 TRIM40Q6P9F5 258 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 WDR74Q6RFH5 385 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 ZADH2Q8N4Q0 377 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 SPICQ8N5J4 248 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 UBL4BQ8N7F7 174 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 ZNF676Q8N7Q3 588 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 ARIH2OSQ8N7S6 290 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 OR4C13Q8NGP0 309 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 OR9A2Q8NGT5 310 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 CT45A3Q8NHU0 189 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 LHFPL5Q8TAF8 219 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 PIFOQ8TCI5 191 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 C11orf40Q8WZ69 217 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 MARC2Q969Z3 335 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 CPNE2Q96FN4 548 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 CMTM7Q96FZ5 175 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 MED8Q96G25 268 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 UBE2E2Q96LR5 201 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 QKIQ96PU8 341 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 GABRG3Q99928 467 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 AIF1LQ9BQI0 150 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 C20orf144Q9BQM9 153 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 TMED9Q9BVK6 235 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 PECRQ9BY49 303 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 MS4A6AQ9H2W1 248 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 ELL3Q9HB65 397 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 WFDC1Q9HC57 220 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 B3GAT2Q9NPZ5 323 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 TMEM45AQ9NWC5 275 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 TAS2R13Q9NYV9 303 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 GSKIPQ9P0R6 139 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 TMEM181Q9P2C4 612 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 THAP10Q9P2Z0 257 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 MLXQ9UH92 298 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 BTNL2Q9UIR0 455 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 ING4Q9UNL4 249 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 C14orf166Q9Y224 244 aaKnown RBP2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 NTNG1Q9Y2I2 539 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 UFC1Q9Y3C8 167 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 ASB4Q9Y574 426 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 TOP2BQ02880 1626 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 WRNQ14191 1432 aaPredicted RBP eCLIP2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 SYNJ1O43426 1573 aa2.99□□□□□ -1.93
HMGB1P12-201ENST00000438594 IGHV4-28A0A0C4DH34 117 aa2.98□□□□□ -1.93
HMGB1P12-201ENST00000438594 ISPDA4D126 451 aa2.98□□□□□ -1.93
HMGB1P12-201ENST00000438594 VPS37CA5D8V6 355 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P12-201ENST00000438594 METTL15A6NJ78 407 aa2.98□□□□□ -1.93
HMGB1P12-201ENST00000438594 DHRS7CA6NNS2 312 aa2.98□□□□□ -1.93
HMGB1P12-201ENST00000438594 FAM166BA8MTA8 275 aa2.98□□□□□ -1.93
HMGB1P12-201ENST00000438594 ZNF724A8MTY0 619 aa2.98□□□□□ -1.93
HMGB1P12-201ENST00000438594 ANKRD65E5RJM6 399 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms