RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 OR5T3Q8NGG3 340 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 OR5AR1Q8NGP9 310 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 OR2L8Q8NGY9 312 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 OR8U1Q8NH10 309 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 PTX4Q96A99 478 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 ISOC2Q96AB3 205 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 SGTBQ96EQ0 304 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 ZNF488Q96MN9 340 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 SCGB3A2Q96PL1 93 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 TMEM27Q9HBJ8 222 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 ZNF355PQ9NSJ1 428 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 DDX19AQ9NUU7 478 aaKnown RBP2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 SLC17A7Q9P2U7 560 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 YTHDF2Q9Y5A9 579 aaKnown RBP2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 PALLDQ8WX93 1383 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 POLA1P09884 1462 aaPredicted RBP2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 GRIN2AQ12879 1464 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 SYNRGQ9UMZ2 1314 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 NUP160Q12769 1436 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 IGHV1-69DA0A0B4J2H0 117 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 IGKV1-8A0A0C4DH67 115 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 A0A0J9YXV3 536 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 LOC100653049A0A140TA62 436 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 GABRR3A8MPY1 467 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 ANKRD65E5RJM6 399 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 KRT34O76011 436 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 SEMA3DO95025 777 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 VAMP5O95183 116 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 OXTP01178 125 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 CTSLP07711 333 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 RHOXF2BP0C7M4 288 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 ZNF806P0C7X5 589 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 PSMC3P17980 439 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 SRMP19623 302 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 PMCHP20382 165 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 MSR1P21757 451 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 GABRR2P28476 465 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 KIR3DL2P43630 455 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 NDUFA8P51970 172 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 CDK5Q00535 292 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 CYP24A1Q07973 514 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 MLIPQ5VWP3 458 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 SAXO2Q658L1 398 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 RWDD4Q6NW29 188 aaKnown RBP2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 WDR82Q6UXN9 313 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 NTM-AS1Q6ZSK4 140 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 MRPL21Q7Z2W9 205 aaKnown RBP2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 ZNF695Q8IW36 515 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 WDFY1Q8IWB7 410 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 LGI3Q8N145 548 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 OR52K1Q8NGK4 314 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 UBALD1Q8TB05 177 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 ITFG1Q8TB96 612 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 NAT6Q93015 286 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 FLYWCH2Q96CP2 140 aaKnown RBP2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 NEURL3Q96EH8 262 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 IL22Q9GZX6 179 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 DEFB129Q9H1M3 183 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 ZNF430Q9H8G1 570 aaPredicted RBP2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 SLC38A10Q9HBR0 1119 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 RGS18Q9NS28 235 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 TSSC4Q9Y5U2 329 aaPredicted RBP2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 UBIAD1Q9Y5Z9 338 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 TMEM14AQ9Y6G1 99 aa2.17□□□□□ -2.06
TRAPPC13-204ENST00000438419 CAMSAP1Q5T5Y3 1602 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 CPS1P31327 1500 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 ABCC2Q92887 1545 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 SOGA1O94964 1423 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 ADAMTS13Q76LX8 1427 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 PCDH11XQ9BZA7 1347 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 CUL7Q14999 1698 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 PBRM1Q86U86 1689 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 ABCC8Q09428 1581 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 AK9Q5TCS8 1911 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 TMEM223A0PJW6 202 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 LRCOL1A6NCL2 159 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 PDZK1P1A8MUH7 402 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 ZNF99A8MXY4 864 aaPredicted RBP2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 NDUFC2-KCTD14E9PQ53 114 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 DNASE2O00115 360 aaPredicted RBP2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 TRDMT1O14717 391 aaKnown RBP2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 RBFOX2O43251 390 aaKnown RBP eCLIP2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 GCM2O75603 506 aaPredicted RBP2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 MBP02144 154 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 APCSP02743 223 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 PRKACAP17612 351 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 RAB5AP20339 215 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 MYL9P24844 172 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 PFN2P35080 140 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 TALDO1P37837 337 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 PPICP45877 212 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 AP1S2P56377 157 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 RPL23P62829 140 aaKnown RBP2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 LCN2P80188 198 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 LOXL1Q08397 574 aaPredicted RBP2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 TFDP2Q14188 446 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 ZNF829Q3KNS6 432 aaPredicted RBP2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 ZNF684Q5T5D7 378 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 FBXW9Q5XUX1 488 aa2.16□□□□□ -2.06
TRAPPC13-204ENST00000438419 WDR86Q86TI4 376 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms