RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 ACTBP60709 375 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 ACTG1P63261 375 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 TMEM234Q8WY98 164 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 THRSPQ92748 146 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 MRGPRFQ96AM1 343 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 AKIRIN1Q9H9L7 192 aaPredicted RBP9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 SDK2Q58EX2 2172 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 ZNF814B7Z6K7 855 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 RAB27BO00194 218 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 CCSO14618 274 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 ISG15P05161 165 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 H2BFMP0C1H6 154 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 SLC2A1P11166 492 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 NQO2P16083 231 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 C17orf67Q0P5P2 114 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 ZNF813Q6ZN06 617 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 DPPA2Q7Z7J5 298 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 TMEM229BQ8NBD8 167 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 MFSD8Q8NHS3 518 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 ELP5Q8TE02 316 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 RNF133Q8WVZ7 376 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 RSRP1Q9BUV0 290 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 PHF7Q9BWX1 381 aaPredicted RBP9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 C1orf198Q9H425 327 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 CHST11Q9NPF2 352 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 SERINC1Q9NRX5 453 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 FAM206AQ9NX38 181 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 GDF2Q9UK05 429 aaPredicted RBP9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 TRBV11-1A0A0K0K1C0 115 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 LOC390937A0A1W2PQ73 354 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 HMSDA8MTL9 139 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 CYB5AP00167 134 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 CDAP32320 146 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 CHAF1BQ13112 559 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 ZNF528Q3MIS6 628 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 KRBOX4Q5JUW0 171 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 C1orf100Q5SVJ3 147 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 LCN10Q6JVE6 187 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 BPIFB2Q8N4F0 458 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 OR5M9Q8NGP3 310 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 NUDCD2Q8WVJ2 157 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 TCTEX1D2Q8WW35 142 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 PLEKHA6Q9Y2H5 1048 aa9.25□□□□□ -0.93
CLSTN1-203ENST00000435891 A0A1W2PNR3 127 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 LIPT2A6NK58 231 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 ZNF736B4DX44 427 aaPredicted RBP9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 GDF9O60383 454 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 RAMP1O60894 148 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 NFYBP25208 207 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 GNALP38405 381 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 ZP4Q12836 540 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 DHRS2Q13268 280 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 SHBQ15464 509 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 LIN54Q6MZP7 749 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 RHBDD2Q6NTF9 364 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 PAPD4Q6PIY7 484 aaKnown RBP9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 ST8SIA1Q92185 356 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 SLAMF6Q96DU3 332 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 ZFP57Q9NU63 452 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 VSIG4Q9Y279 399 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 BCAT2O15382 392 aaPredicted RBP9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 G0S2P27469 103 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 MYBPHQ13203 477 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 PEA15Q15121 130 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 ZNF660Q6AZW8 331 aaPredicted RBP9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 OR10G3Q8NGC4 313 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 POC1BQ8TC44 478 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 OR6C1Q96RD1 312 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 POTEKPQ9BYX7 375 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 WDR13Q9H1Z4 485 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 KLRF1Q9NZS2 232 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 EML6Q6ZMW3 1958 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 TRIOBPQ9H2D6 2365 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 A6NIZ1 184 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 HEXBP07686 556 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 NR2C1P13056 603 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 BTF3P20290 206 aaKnown RBP9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 DAP3P51398 398 aaKnown RBP9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 LUMP51884 338 aaPredicted RBP9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 RAP1BP61224 184 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 RAP1AP62834 184 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 NKAIN1Q4KMZ8 207 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 PTCRAQ6ISU1 281 aaPredicted RBP9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 FJX1Q86VR8 437 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 OR13C9Q8NGT0 318 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 C14orf79Q96F83 325 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 SEC22AQ96IW7 307 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 FSCN3Q9NQT6 498 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 ZNF319Q9P2F9 582 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 PI4KAP42356 2102 aa9.24□□□□□ -0.93
CLSTN1-203ENST00000435891 KANTRA0A1W2PQU2 76 aa9.23□□□□□ -0.93
CLSTN1-203ENST00000435891 PMS2P1A4D2B8 440 aa9.23□□□□□ -0.93
CLSTN1-203ENST00000435891 GNB3P16520 340 aa9.23□□□□□ -0.93
CLSTN1-203ENST00000435891 PTGDSP41222 190 aa9.23□□□□□ -0.93
CLSTN1-203ENST00000435891 APOBEC1P41238 236 aaKnown RBP9.23□□□□□ -0.93
CLSTN1-203ENST00000435891 PCP4P48539 62 aa9.23□□□□□ -0.93
CLSTN1-203ENST00000435891 MMP16P51512 607 aa9.23□□□□□ -0.93
CLSTN1-203ENST00000435891 TOMM20Q15388 145 aa9.23□□□□□ -0.93
CLSTN1-203ENST00000435891 ZNF260Q3ZCT1 412 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms