RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 DEFB134Q4QY38 66 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 FAM78AQ5JUQ0 283 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF283Q8N7M2 679 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF681Q96N22 645 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 METTL7AQ9H8H3 244 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 MRPL22Q9NWU5 206 aaKnown RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 SLCO1B1Q9Y6L6 691 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 KIF26BQ2KJY2 2108 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 TRBV5-5A0A0J9YX44 114 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 SDCBPO00560 298 aaPredicted RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 GALTP07902 379 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 UBE2KP61086 200 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 FKBP1BP68106 108 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 RPP30P78346 268 aaKnown RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 NTHL1P78549 312 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 HMGN3Q15651 99 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 LINC01590Q5TEZ4 76 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 RPUSD3Q6P087 351 aaKnown RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 KIRREL2Q6UWL6 708 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 FAM213BQ8TBF2 198 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 MKKSQ9NPJ1 570 aaPredicted RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 UBQLN4Q9NRR5 601 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 APOBEC3BQ9UH17 382 aaKnown RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 SERTAD3Q9UJW9 196 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM184BQ9Y519 407 aaPredicted RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 RFNGQ9Y644 331 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 H0YL77 283 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 CSTBP04080 98 aaKnown RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 TRGC1P0CF51 173 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 CSRP1P21291 193 aaKnown RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 RPL12P30050 165 aaKnown RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 CHRNB4P30926 498 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 KIR3DL2P43630 455 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 MEP1BQ16820 701 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF705AQ6ZN79 300 aaPredicted RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 LRRC25Q8N386 305 aaPredicted RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 PELI2Q9HAT8 420 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 OR14J1Q9UGF5 321 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 CES1P1Q9UKY3 287 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 DHDHQ9UQ10 334 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 TP53TG5Q9Y2B4 290 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 FANCMQ8IYD8 2048 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 OTOL1A6NHN0 477 aaPredicted RBP6.68□□□□□ -1.34
CPSF6-202ENST00000435070 A6NNC1 897 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 BRINP1O60477 761 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 SNCAP37840 140 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM33P57088 247 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 FHL1Q13642 323 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 AWAT2Q6E213 333 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 CLEC18BQ6UXF7 455 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF664Q8N3J9 261 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 KREMEN2Q8NCW0 462 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 MVB12AQ96EY5 273 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 SPACA5Q96QH8 159 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 TBL1XR1Q9BZK7 514 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 PARP11Q9NR21 331 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 RAB22AQ9UL26 194 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 DOCK9Q9BZ29 2069 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 MYO9BQ13459 2157 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 A0A0A6YYH2 397 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 A6NJ64 397 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 C8AP07357 584 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 ADH5P11766 374 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 PMELP40967 661 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 ERVFRD-1P60508 538 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 NHLH2Q02577 135 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 PLAURQ03405 335 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 MESTQ5EB52 335 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 DUSP22Q9NRW4 184 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 SAGE1Q9NXZ1 904 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 YBX2Q9Y2T7 364 aaKnown RBP6.68□□□□□ -1.34
CPSF6-202ENST00000435070 FRMPD3Q5JV73 1810 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 A0A1W2PRU2 124 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 KIAA1324LA8MWY0 1029 aaPredicted RBP6.68□□□□□ -1.34
CPSF6-202ENST00000435070 CX3CR1P49238 355 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 HAGHQ16775 308 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 ANKRD55Q3KP44 614 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 CDCP2Q5VXM1 449 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 COX15Q7KZN9 410 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 PARS2Q7L3T8 475 aaKnown RBP6.68□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM156Q8N614 296 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 PNLDC1Q8NA58 520 aaKnown RBP6.68□□□□□ -1.34
CPSF6-202ENST00000435070 FRZBQ92765 325 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 TPSD1Q9BZJ3 242 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 SLC35B3Q9H1N7 401 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 FAM212BQ9NTI7 297 aaPredicted RBP6.68□□□□□ -1.34
CPSF6-202ENST00000435070 CBLN4Q9NTU7 201 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 ADAM29Q9UKF5 820 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 ENTPD2Q9Y5L3 495 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 A0A1W2PPV9 198 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 LMX1BO60663 402 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 EOMESO95936 686 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 IL2RAP01589 272 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 MELTFP08582 738 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 PGA4P0DJD7 388 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 PGA5P0DJD9 388 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 HLA-GP17693 338 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 RAB35Q15286 201 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 PNLIPRP3Q17RR3 467 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 OR4N2Q8NGD1 307 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms