RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 MED12Q93074 2177 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 TRAV36DV7A0A075B6V5 113 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 TRBV5-5A0A0J9YX44 114 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 A0A1W2PPE2 198 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 CPED1A4D0V7 1026 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 GLSO94925 669 aaPredicted RBP10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 FOLR1P15328 257 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 RASGEF1BQ0VAM2 473 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 C2orf76Q3KRA6 126 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 EMC4Q5J8M3 183 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 ZNF627Q7L945 461 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 DAZLQ92904 295 aaKnown RBP10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 NRIP2Q9BQI9 281 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 CHST6Q9GZX3 395 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 MMP24Q9Y5R2 645 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 ATG2AQ2TAZ0 1938 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 CFAP54Q96N23 3096 aa10.93□□□□□ -0.66
SEMA3F-206ENST00000434342 TMED7-TICAM2A0A0A6YYA0 188 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 PRSS37A4D1T9 235 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 LILRA5A6NI73 299 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 EIF1AYO14602 144 aaKnown RBP10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 EIF4E2O60573 245 aaKnown RBP10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 MT-ND4LP03901 98 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 IGKV3-11P04433 115 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 HLA-DOBP13765 273 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 FABP4P15090 132 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 SLC6A8P48029 635 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 RGS19P49795 217 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 RAB4BP61018 213 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 LIN54Q6MZP7 749 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 SLC18B1Q6NT16 456 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 OR4C16Q8NGL9 310 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 OR1L3Q8NH93 324 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 LIPHQ8WWY8 451 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 NKD1Q969G9 470 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 ZNF587Q96SQ5 575 aaPredicted RBP10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 OR2S2Q9NQN1 319 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 CGGBP1Q9UFW8 167 aaPredicted RBP10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 TP53TG5Q9Y2B4 290 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 TMED7Q9Y3B3 224 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 RTTNQ86VV8 2226 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 TMEM272A0A1B0GTI8 110 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 BGLAPP02818 100 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 FBLP22087 321 aaKnown RBP10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 CRABP1P29762 137 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 DLSTP36957 453 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 RPL27P61353 136 aaKnown RBP10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 PKIAP61925 76 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 INSM1Q01101 510 aaPredicted RBP10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 EGR3Q06889 387 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 EIF2B1Q14232 305 aaKnown RBP10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 SLC17A1Q14916 467 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 C15orf54Q8N8G6 183 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 RPS4Y2Q8TD47 263 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 NPRL2Q8WTW4 380 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 FAM3DQ96BQ1 224 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 CCNL2Q96S94 520 aaPredicted RBP10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 RNF122Q9H9V4 155 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 GPR27Q9NS67 375 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 CENPMQ9NSP4 180 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 DHDHQ9UQ10 334 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 COA3Q9Y2R0 106 aaPredicted RBP10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 GGT3PA6NGU5 568 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 WNT11O96014 354 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 CSN2P05814 226 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 PAX6P26367 422 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 CD27P26842 260 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 FAM189A2Q15884 450 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 LINC00346Q8IVM7 164 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 FAM219AQ8IW50 185 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 JAGN1Q8N5M9 183 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 OR1J4Q8NGS1 313 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 JSRP1Q96MG2 331 aaPredicted RBP10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 OR8B4Q96RC9 309 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 SEC11CQ9BY50 192 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 PARP12Q9H0J9 701 aaKnown RBP10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 PTGES2Q9H7Z7 377 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 KCNIP3Q9Y2W7 256 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 ETV7Q9Y603 341 aa10.92□□□□□ -0.66
SEMA3F-206ENST00000434342 XRCC3O43542 346 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 CTAG2O75638 210 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 AHSA1O95433 338 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 OPN1LWP04000 364 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 HEXAP06865 529 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 IL11P20809 199 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 FAUP35544 74 aaKnown RBP10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 MNDAP41218 407 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 EIF1AXP47813 144 aaKnown RBP10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 ID4P47928 161 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 HSD11B2P80365 405 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 NHLH2Q02577 135 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 MFGE8Q08431 387 aaPredicted RBP10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 RAB11BQ15907 218 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 COL13A1Q5TAT6 717 aaPredicted RBP10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 C1orf140Q5VVS0 124 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 JMJD6Q6NYC1 403 aaPredicted RBP10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 MRI1Q9BV20 369 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 WWTR1Q9GZV5 400 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 VDAC3Q9Y277 283 aa10.91□□□□□ -0.66
SEMA3F-206ENST00000434342 FREM3P0C091 2139 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms