RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 DIRC2Q96SL1 478 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 PRRT1Q99946 306 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 ANGPTL4Q9BY76 406 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 PBOV1Q9GZY1 135 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 OR10A4Q9H209 315 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 METTL7AQ9H8H3 244 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 SH2D2AQ9NP31 389 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 MED11Q9P086 117 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 UBQLN2Q9UHD9 624 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 OPN4Q9UHM6 478 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 KIF25Q9UIL4 384 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 MAB21L2Q9Y586 359 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 MRPS18BQ9Y676 258 aaKnown RBP6.58□□□□□ -1.36
COL17A1-204ENST00000433822 CHCHD2Q9Y6H1 151 aaPredicted RBP6.58□□□□□ -1.36
COL17A1-204ENST00000433822 CACNA1CQ13936 2221 aa6.58□□□□□ -1.36
COL17A1-204ENST00000433822 TEP1Q99973 2627 aaKnown RBP6.58□□□□□ -1.36
COL17A1-204ENST00000433822 CFAP46Q8IYW2 2715 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 IGHV1-45A0A0A0MS14 117 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 IGHV3-20A0A0C4DH32 117 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 A0A0U1RQV5 110 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 TEX51A0A1B0GUA7 166 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 RPS10-NUDT3A0A1W2PQS6 291 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 CEACAM18A8MTB9 384 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 TMEM14DPA8MWL7 114 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 B4E171 279 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 DISC1C4P0D8 188 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 C9J4A7 227 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 MCRIP1C9JLW8 97 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 D6RAR5 112 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 SMLR1H3BR10 107 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 RAB27BO00194 218 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 SHOXO15266 292 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 SYT7O43581 403 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 SIGLEC6O43699 453 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 EFNA2O43921 213 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 CA11O75493 328 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 B3GALNT1O75752 331 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 KDM4BO94953 1096 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 RAB3DO95716 219 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 CER1O95813 267 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 CYB5AP00167 134 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 CD8AP01732 235 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 KLK3P07288 261 aaPredicted RBP6.57□□□□□ -1.36
COL17A1-204ENST00000433822 GP1BAP07359 652 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 RPA2P15927 270 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF24P17028 368 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 RAB3AP20336 220 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 M6PRP20645 277 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 NFYAP23511 347 aaPredicted RBP6.57□□□□□ -1.36
COL17A1-204ENST00000433822 OTX1P32242 354 aaPredicted RBP6.57□□□□□ -1.36
COL17A1-204ENST00000433822 TSPAN7P41732 249 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 RAD52P43351 418 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 SELENOPP49908 381 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF81P51508 661 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 EFNB2P52799 333 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 DSCR4P56555 118 aaPredicted RBP6.57□□□□□ -1.36
COL17A1-204ENST00000433822 CLRN1P58418 232 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 UBE2MP61081 183 aaKnown RBP6.57□□□□□ -1.36
COL17A1-204ENST00000433822 TSPAN5P62079 268 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 HIST1H3AP68431 136 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 QRFPP83859 136 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 MC2RQ01718 297 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 FGL1Q08830 312 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 PMPCAQ10713 525 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 GK2Q14410 553 aaPredicted RBP6.57□□□□□ -1.36
COL17A1-204ENST00000433822 PPA1Q15181 289 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 CSRP2Q16527 193 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 PNLIPRP3Q17RR3 467 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF260Q3ZCT1 412 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 C6orf183Q5T699 404 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 HIST2H3PS2Q5TEC6 136 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 RTL6Q6ICC9 239 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 TMEM65Q6PI78 240 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 LRFN4Q6PJG9 635 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 TMPPEQ6ZT21 453 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 HIST2H3AQ71DI3 136 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 DOK3Q7L591 496 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 BIVMQ86UB2 503 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 SULF2Q8IWU5 870 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 FTMTQ8N4E7 242 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 BEST4Q8NFU0 473 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 OR1M1Q8NGA1 313 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 OR10S1Q8NGN2 331 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 OR2AJ1Q8NGZ0 328 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 PAQR8Q8TEZ7 354 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 SSC4DQ8WTU2 575 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 GCDHQ92947 438 aaPredicted RBP6.57□□□□□ -1.36
COL17A1-204ENST00000433822 DACT3Q96B18 629 aaPredicted RBP6.57□□□□□ -1.36
COL17A1-204ENST00000433822 CCDC120Q96HB5 630 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 TMEM41AQ96HV5 264 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 ZC3H10Q96K80 434 aaKnown RBP6.57□□□□□ -1.36
COL17A1-204ENST00000433822 SFXN2Q96NB2 322 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 GINS4Q9BRT9 223 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 SF3B5Q9BWJ5 86 aaKnown RBP6.57□□□□□ -1.36
COL17A1-204ENST00000433822 DEFB126Q9BYW3 111 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 ULBP3Q9BZM4 244 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 ATG5Q9H1Y0 275 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 NKIRAS2Q9NYR9 191 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 EIF3KQ9UBQ5 218 aaKnown RBP6.57□□□□□ -1.36
COL17A1-204ENST00000433822 ING1Q9UK53 422 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms