RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 C20orf204Q6ZNR8 217 aa13.67□□□□□ -0.22
SF1-208ENST00000432725 CFAP77Q6ZQR2 320 aa13.67□□□□□ -0.22
SF1-208ENST00000432725 KRTAP1-3Q8IUG1 177 aa13.67□□□□□ -0.22
SF1-208ENST00000432725 ELMOD2Q8IZ81 293 aa13.67□□□□□ -0.22
SF1-208ENST00000432725 LRRC75A-AS1Q8N1F1 130 aa13.67□□□□□ -0.22
SF1-208ENST00000432725 MFSD4AQ8N468 514 aa13.67□□□□□ -0.22
SF1-208ENST00000432725 WFDC11Q8NEX6 87 aa13.67□□□□□ -0.22
SF1-208ENST00000432725 RGP1Q92546 391 aaPredicted RBP13.67□□□□□ -0.22
SF1-208ENST00000432725 ATF6BQ99941 703 aa13.67□□□□□ -0.22
SF1-208ENST00000432725 USB1Q9BQ65 265 aaKnown RBP13.67□□□□□ -0.22
SF1-208ENST00000432725 TMEM204Q9BSN7 226 aa13.67□□□□□ -0.22
SF1-208ENST00000432725 UBTD1Q9HAC8 227 aa13.67□□□□□ -0.22
SF1-208ENST00000432725 PNRC2Q9NPJ4 139 aaKnown RBP13.67□□□□□ -0.22
SF1-208ENST00000432725 G6PC2Q9NQR9 355 aa13.67□□□□□ -0.22
SF1-208ENST00000432725 FAM206AQ9NX38 181 aa13.67□□□□□ -0.22
SF1-208ENST00000432725 CMAHPQ9Y471 501 aa13.67□□□□□ -0.22
SF1-208ENST00000432725 ABCA4P78363 2273 aa13.67□□□□□ -0.22
SF1-208ENST00000432725 ZNF469Q96JG9 3925 aaPredicted RBP13.67□□□□□ -0.22
SF1-208ENST00000432725 SETD2Q9BYW2 2564 aaPredicted RBP13.66□□□□□ -0.22
SF1-208ENST00000432725 CLEC2LP0C7M8 214 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 PTBP1P26599 531 aaKnown RBP eCLIP13.66□□□□□ -0.22
SF1-208ENST00000432725 APEX1P27695 318 aaKnown RBP13.66□□□□□ -0.22
SF1-208ENST00000432725 OTX1P32242 354 aaPredicted RBP13.66□□□□□ -0.22
SF1-208ENST00000432725 PPP5CP53041 499 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 NKX6-1P78426 367 aaPredicted RBP13.66□□□□□ -0.22
SF1-208ENST00000432725 TSPO2Q5TGU0 170 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 SHEQ5VZ18 495 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 SFXN4Q6P4A7 337 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 METAP1DQ6UB28 335 aaPredicted RBP13.66□□□□□ -0.22
SF1-208ENST00000432725 Q6ZT83 130 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 CCDC190Q86UF4 302 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 ZNF100Q8IYN0 542 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 SLC22A24Q8N4F4 322 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 OR13C5Q8NGS8 318 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 ITFG2Q969R8 447 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 SPTSSAQ969W0 71 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 S100PBPQ96BU1 408 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 ZNF775Q96BV0 537 aaPredicted RBP13.66□□□□□ -0.22
SF1-208ENST00000432725 CMTM3Q96MX0 182 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 ALKBH3Q96Q83 286 aaPredicted RBP13.66□□□□□ -0.22
SF1-208ENST00000432725 TCF7L1Q9HCS4 588 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 NOX4Q9NPH5 578 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 ABRACLQ9P1F3 81 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 UPB1Q9UBR1 384 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 FOXJ3Q9UPW0 622 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 DHDHQ9UQ10 334 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 TIMM10BQ9Y5J6 103 aa13.66□□□□□ -0.22
SF1-208ENST00000432725 VPS13CQ709C8 3753 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 SHISA3A0PJX4 238 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 MEGF11A6BM72 1044 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 RER1O15258 196 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 SMPD2O60906 423 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 BMP4P12644 408 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 FSTP19883 344 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 CFPP27918 469 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 SCAND1P57086 179 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 MFGE8Q08431 387 aaPredicted RBP13.65□□□□□ -0.22
SF1-208ENST00000432725 SPATC1Q76KD6 591 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 WFDC8Q8IUA0 241 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 TSEN15Q8WW01 171 aaKnown RBP13.65□□□□□ -0.22
SF1-208ENST00000432725 IGFBPL1Q8WX77 278 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 TMEM106AQ96A25 262 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 PLPPR2Q96GM1 343 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 KCNS3Q9BQ31 491 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 SLC30A2Q9BRI3 323 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 PPIL3Q9H2H8 161 aaKnown RBP13.65□□□□□ -0.22
SF1-208ENST00000432725 SLC7A10Q9NS82 523 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 CKLFQ9UBR5 152 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 MALT1Q9UDY8 824 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 FBXL3Q9UKT7 428 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 GTF2A1LQ9UNN4 478 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 MED13LQ71F56 2210 aa13.65□□□□□ -0.22
SF1-208ENST00000432725 PIN1P1O15428 100 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 RGS5O15539 181 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 SGCEO43556 437 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 WNT11O96014 354 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 IL32P24001 234 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 TSC22D1Q15714 1073 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 SLC36A2Q495M3 483 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 CCDC92Q53HC0 331 aaPredicted RBP13.64□□□□□ -0.23
SF1-208ENST00000432725 FAM27D1Q5T7N8 215 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 OTPQ5XKR4 325 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 DRAM2Q6UX65 266 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 ZNF813Q6ZN06 617 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 SLC16A14Q7RTX9 510 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 CCL19Q99731 98 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 PBOV1Q9GZY1 135 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 PLEK2Q9NYT0 353 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 RABL2AQ9UBK7 228 aaPredicted RBP13.64□□□□□ -0.23
SF1-208ENST00000432725 PRSS50Q9UI38 385 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 ZNF391Q9UJN7 358 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 RABL2BQ9UNT1 228 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 SLC22A13Q9Y226 551 aa13.64□□□□□ -0.23
SF1-208ENST00000432725 A0A0G2JK05 382 aa13.63□□□□□ -0.23
SF1-208ENST00000432725 A0A0U1RQV5 110 aa13.63□□□□□ -0.23
SF1-208ENST00000432725 OR6C6A6NF89 314 aa13.63□□□□□ -0.23
SF1-208ENST00000432725 VGLL3A8MV65 326 aa13.63□□□□□ -0.23
SF1-208ENST00000432725 CTDSP2O14595 271 aa13.63□□□□□ -0.23
SF1-208ENST00000432725 TTRP02766 147 aa13.63□□□□□ -0.23
SF1-208ENST00000432725 COX5BP10606 129 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms