RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 C1QL3Q5VWW1 255 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 POMZP3Q6PJE2 187 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 LRFN4Q6PJG9 635 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 PGAP1Q75T13 922 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 DCXRQ7Z4W1 244 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 TMED4Q7Z7H5 227 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 BIVMQ86UB2 503 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 INO80EQ8NBZ0 244 aaPredicted RBP7.74□□□□□ -1.17
GABPB1-205ENST00000429662 TSTD1Q8NFU3 115 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 OR1M1Q8NGA1 313 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 OR13C8Q8NGS7 320 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 NUBPLQ8TB37 319 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 ST7LQ8TDW4 575 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 PCNPQ8WW12 178 aaKnown RBP7.74□□□□□ -1.17
GABPB1-205ENST00000429662 DVL3Q92997 716 aaPredicted RBP7.74□□□□□ -1.17
GABPB1-205ENST00000429662 ZNF524Q96C55 264 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 RTN4RQ9BZR6 473 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 TINAGL1Q9GZM7 467 aaPredicted RBP7.74□□□□□ -1.17
GABPB1-205ENST00000429662 TGIF2Q9GZN2 237 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 PIGMQ9H3S5 423 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 CHST11Q9NPF2 352 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 IFT46Q9NQC8 304 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 ALKBH4Q9NXW9 302 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 KLHL13Q9P2N7 655 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 SHPKQ9UHJ6 478 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 SRPK3Q9UPE1 567 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 PRELID1Q9Y255 219 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 CENPEQ02224 2701 aa7.74□□□□□ -1.17
GABPB1-205ENST00000429662 IGHV1OR15-9A0A0B4J2B8 117 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 C9orf170A2RU37 121 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 MEIS3P1A6NDR6 274 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 VSTM2BA6NLU5 285 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 MPTX1A8MV57 137 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 MS4A18H0YCH9 400 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 M0QYG6 137 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 RAB27BO00194 218 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 TSPAN4O14817 238 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 DUS4LO95620 317 aaKnown RBP7.73□□□□□ -1.17
GABPB1-205ENST00000429662 HLA-AP01891 365 aaKnown RBP7.73□□□□□ -1.17
GABPB1-205ENST00000429662 FCER2P06734 321 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 GSTP1P09211 210 aaKnown RBP7.73□□□□□ -1.17
GABPB1-205ENST00000429662 NR2C1P13056 603 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 ATF4P18848 351 aaPredicted RBP7.73□□□□□ -1.17
GABPB1-205ENST00000429662 POU3F2P20265 443 aaPredicted RBP7.73□□□□□ -1.17
GABPB1-205ENST00000429662 MAOBP27338 520 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 CX3CR1P49238 355 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 CXADRP78310 365 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 HSF1Q00613 529 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 NAAAQ02083 359 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 SPOCK1Q08629 439 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 ZNF273Q14593 569 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 ARL6IP1Q15041 203 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 TAF13Q15543 124 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 MS4A18Q3C1V0 323 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 SCGB2B2Q4G0G5 96 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 PAN3Q58A45 887 aaKnown RBP7.73□□□□□ -1.17
GABPB1-205ENST00000429662 SLC25A53Q5H9E4 307 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 THEM4Q5T1C6 240 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 PXDC1Q5TGL8 231 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 PRAMEF17Q5VTA0 474 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 JMJD6Q6NYC1 403 aaPredicted RBP7.73□□□□□ -1.17
GABPB1-205ENST00000429662 ZNF529Q6P280 563 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 ZNF813Q6ZN06 617 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 DBX2Q6ZNG2 339 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 TRAPPC6BQ86SZ2 158 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 FJX1Q86VR8 437 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 LSRQ86X29 649 aaPredicted RBP7.73□□□□□ -1.17
GABPB1-205ENST00000429662 GALNT16Q8N428 558 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 ARRDC1Q8N5I2 433 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.73□□□□□ -1.17
GABPB1-205ENST00000429662 CCDC54Q8NEL0 328 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 OR5L2Q8NGL0 311 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 OR1J2Q8NGS2 313 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 OR10K1Q8NGX5 313 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 SLC6A7Q99884 636 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 VRK1Q99986 396 aaPredicted RBP7.73□□□□□ -1.17
GABPB1-205ENST00000429662 B3GNT4Q9C0J1 378 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 TMEM185BQ9H7F4 350 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 SERINC1Q9NRX5 453 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 FAM206AQ9NX38 181 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 CGGBP1Q9UFW8 167 aaPredicted RBP7.73□□□□□ -1.17
GABPB1-205ENST00000429662 CRYBG3Q68DQ2 2970 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 DNHD1Q96M86 4753 aa7.73□□□□□ -1.17
GABPB1-205ENST00000429662 RNF222A6NCQ9 220 aa7.72□□□□□ -1.17
GABPB1-205ENST00000429662 CDK2AP1O14519 115 aa7.72□□□□□ -1.17
GABPB1-205ENST00000429662 TOX3O15405 576 aaPredicted RBP7.72□□□□□ -1.17
GABPB1-205ENST00000429662 SYT7O43581 403 aa7.72□□□□□ -1.17
GABPB1-205ENST00000429662 PRKNO60260 465 aaPredicted RBP7.72□□□□□ -1.17
GABPB1-205ENST00000429662 TSPAN9O75954 239 aa7.72□□□□□ -1.17
GABPB1-205ENST00000429662 STK17BO94768 372 aa7.72□□□□□ -1.17
GABPB1-205ENST00000429662 SPDEFO95238 335 aa7.72□□□□□ -1.17
GABPB1-205ENST00000429662 WISP1O95388 367 aa7.72□□□□□ -1.17
GABPB1-205ENST00000429662 NAT1P18440 290 aa7.72□□□□□ -1.17
GABPB1-205ENST00000429662 CNR1P21554 472 aa7.72□□□□□ -1.17
GABPB1-205ENST00000429662 LAP3P28838 519 aa7.72□□□□□ -1.17
GABPB1-205ENST00000429662 DLSTP36957 453 aa7.72□□□□□ -1.17
GABPB1-205ENST00000429662 PRKXP51817 358 aa7.72□□□□□ -1.17
GABPB1-205ENST00000429662 EIF5AP63241 154 aaKnown RBP7.72□□□□□ -1.17
GABPB1-205ENST00000429662 RNF4P78317 190 aa7.72□□□□□ -1.17
GABPB1-205ENST00000429662 IL13RA1P78552 427 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms