RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 UBBP0CG47 229 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 BMP4P12644 408 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 PPP3CBP16298 524 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 BDKRB2P30411 391 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 TNFSF8P32971 234 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 TALDO1P37837 337 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 GNALP38405 381 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 MNDAP41218 407 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 CA7P43166 264 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 SOX2P48431 317 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 FOXG1P55316 489 aaPredicted RBP7.88□□□□□ -1.15
NR1I3-209ENST00000428574 FAM189A2Q15884 450 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 TMEM42Q69YG0 159 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 MTFR2Q6P444 385 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 BHLHA15Q7RTS1 189 aaPredicted RBP7.88□□□□□ -1.15
NR1I3-209ENST00000428574 COMMD2Q86X83 199 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 LYPD6Q86Y78 171 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 RDH10Q8IZV5 341 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 ZNF610Q8N9Z0 462 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 CPEB3Q8NE35 698 aaKnown RBP7.88□□□□□ -1.15
NR1I3-209ENST00000428574 CSNK2A3Q8NEV1 391 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 SEMA6DQ8NFY4 1073 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 SORCS2Q96PQ0 1159 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 ABCG5Q9H222 651 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 ABCB9Q9NP78 766 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 CYSLTR2Q9NS75 346 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 GHRLQ9UBU3 117 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 DAPK2Q9UIK4 370 aa7.88□□□□□ -1.15
NR1I3-209ENST00000428574 IGF2RP11717 2491 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 A0A096LPE4 126 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 A0A0A6YYH2 397 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 hCG_38984A0A1B0GV85 526 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 A0A1W2PPZ6 126 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 C5orf49A4QMS7 147 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 A6NJ64 397 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 CTDSP2O14595 271 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 MAGEB3O15480 346 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 TBX1O43435 398 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 RAD51DO75771 328 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 LYZL6O75951 148 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 SCGNO76038 276 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 DBHP09172 617 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 SLC2A1P11166 492 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 PRF1P14222 555 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 ADRA2CP18825 462 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 ATF1P18846 271 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 PRKACBP22694 351 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 IL32P24001 234 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 PEX19P40855 299 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 ALDH3B1P43353 468 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 EVX1P49640 407 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 MRPS10P82664 201 aaKnown RBP7.87□□□□□ -1.15
NR1I3-209ENST00000428574 HGFACQ04756 655 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 RIPPLY1Q0D2K3 151 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 CNN3Q15417 329 aaKnown RBP7.87□□□□□ -1.15
NR1I3-209ENST00000428574 ODF4Q2M2E3 257 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 ZNF181Q2M3W8 571 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 SLC25A35Q3KQZ1 300 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 FBXL19-AS1Q494R0 122 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 HIKESHIQ53FT3 197 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 UBE2NLQ5JXB2 153 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 CLVS2Q5SYC1 327 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 IDNKQ5T6J7 187 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 C9orf135Q5VTT2 229 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 ASPHD2Q6ICH7 369 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 XKRXQ6PP77 449 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 FBXW12Q6X9E4 464 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 MDP1Q86V88 176 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 ZNF584Q8IVC4 421 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 GDPD1Q8N9F7 314 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 NAXEQ8NCW5 288 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 DNAAF1Q8NEP3 725 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 SLC30A7Q8NEW0 376 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 OR1M1Q8NGA1 313 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 TRMT10AQ8TBZ6 339 aaKnown RBP7.87□□□□□ -1.15
NR1I3-209ENST00000428574 SSC4DQ8WTU2 575 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 RND1Q92730 232 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 PIGTQ969N2 578 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 SGK3Q96BR1 496 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 FGGYQ96C11 551 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 ADAT3Q96EY9 351 aaPredicted RBP7.87□□□□□ -1.15
NR1I3-209ENST00000428574 POM121Q96HA1 1249 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 REEP6Q96HR9 211 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 LYZL4Q96KX0 146 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 GFI1Q99684 422 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 SOSTQ9BQB4 213 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 REPIN1Q9BWE0 567 aaKnown RBP7.87□□□□□ -1.15
NR1I3-209ENST00000428574 MIXL1Q9H2W2 232 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 BRD7Q9NPI1 651 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 ZNF319Q9P2F9 582 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 EIF3KQ9UBQ5 218 aaKnown RBP7.87□□□□□ -1.15
NR1I3-209ENST00000428574 NCOR2Q9Y618 2525 aa7.87□□□□□ -1.15
NR1I3-209ENST00000428574 CELSR3Q9NYQ7 3312 aa7.86□□□□□ -1.15
NR1I3-209ENST00000428574 DMXL2Q8TDJ6 3036 aa7.86□□□□□ -1.15
NR1I3-209ENST00000428574 A0A0G2JNJ9 132 aa7.86□□□□□ -1.15
NR1I3-209ENST00000428574 ZNF816-ZNF321PA0A0X1KG74 233 aa7.86□□□□□ -1.15
NR1I3-209ENST00000428574 ZNF503-AS2A6NEH8 195 aa7.86□□□□□ -1.15
NR1I3-209ENST00000428574 BPNT1O95861 308 aa7.86□□□□□ -1.15
NR1I3-209ENST00000428574 PATE4P0C8F1 98 aa7.86□□□□□ -1.15
NR1I3-209ENST00000428574 SELEP16581 610 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms