RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 OR51A2Q8NGJ7 313 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 TVP23CQ96ET8 276 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 ZNF385AQ96PM9 386 aaKnown RBP14.36□□□□□ -0.11
C9orf3-206ENST00000428313 NUDT16L1Q9BRJ7 211 aaKnown RBP14.36□□□□□ -0.11
C9orf3-206ENST00000428313 RIMS4Q9H426 269 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-206ENST00000428313 CXXC1Q9P0U4 656 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-206ENST00000428313 CGGBP1Q9UFW8 167 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-206ENST00000428313 URGCP-MRPS24S4R325 110 aa14.36□□□□□ -0.11
C9orf3-206ENST00000428313 B4DEV8 164 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 PRH1P02810 166 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 RPLP1P05386 114 aaKnown RBP14.35□□□□□ -0.11
C9orf3-206ENST00000428313 ACAA2P42765 397 aaKnown RBP14.35□□□□□ -0.11
C9orf3-206ENST00000428313 P2RY1P47900 373 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 H3F3AP84243 136 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 ABLIM2Q6H8Q1 611 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 SLC8B1Q6J4K2 584 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 ULK3Q6PHR2 472 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 ZNF283Q8N7M2 679 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 COX18Q8N8Q8 333 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 SEMA6DQ8NFY4 1073 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 OR4K15Q8NH41 348 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 CCNL2Q96S94 520 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-206ENST00000428313 NKX3-1Q99801 234 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-206ENST00000428313 G6PC3Q9BUM1 346 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 FBXO34Q9NWN3 711 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 TAS2R4Q9NYW5 299 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 ZNF346Q9UL40 294 aaKnown RBP14.35□□□□□ -0.11
C9orf3-206ENST00000428313 IGKV1-8A0A0C4DH67 115 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 FIGNL2A6NMB9 653 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 TK1P04183 234 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 CHRM2P08172 466 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 FOLR1P15328 257 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 PRDX1Q06830 199 aaKnown RBP14.35□□□□□ -0.11
C9orf3-206ENST00000428313 FCRL6Q6DN72 434 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 Q7L0L9 218 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 SLC35E3Q7Z769 313 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 VN1R2Q8NFZ6 395 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 SMARCD2Q92925 531 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 HHIPL1Q96JK4 782 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 SMIM3Q9BZL3 60 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 TM7SF3Q9NS93 570 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 DKKL1Q9UK85 242 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 ANAPC10Q9UM13 185 aa14.35□□□□□ -0.11
C9orf3-206ENST00000428313 C19orf53Q9UNZ5 99 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-206ENST00000428313 RBFOX3A6NFN3 312 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 FTCDNL1E5RQL4 147 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 TP53I11O14683 189 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 SOX15O60248 233 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 FHITP49789 147 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 THNSL2Q86YJ6 484 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 OR6N2Q8NGY6 317 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 ASB5Q8WWX0 329 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 TUBD1Q9UJT1 453 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 FOXD3Q9UJU5 478 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-206ENST00000428313 TMEM210A6NLX4 147 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 ZNF705GA8MUZ8 300 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-206ENST00000428313 STATHP02808 62 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 APODP05090 189 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 CCR4P51679 360 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 RND2P52198 227 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 COA6Q5JTJ3 125 aaKnown RBP14.34□□□□□ -0.11
C9orf3-206ENST00000428313 ZNF429Q86V71 674 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 NKAIN3Q8N8D7 197 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 ARSGQ96EG1 525 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 KTI12Q96EK9 354 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-206ENST00000428313 SNX22Q96L94 193 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 TSSK2Q96PF2 358 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 TMEM242Q9NWH2 141 aa14.34□□□□□ -0.11
C9orf3-206ENST00000428313 SRP19P09132 144 aaKnown RBP14.33□□□□□ -0.12
C9orf3-206ENST00000428313 CYBAP13498 195 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 PNLIPP16233 465 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 PPP1CCP36873 323 aaKnown RBP14.33□□□□□ -0.12
C9orf3-206ENST00000428313 GABRA4P48169 554 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 CLDN6P56747 220 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 NTHL1P78549 312 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 INSM1Q01101 510 aaPredicted RBP14.33□□□□□ -0.12
C9orf3-206ENST00000428313 HAGHQ16775 308 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 DPY19L4Q7Z388 723 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 ZNF550Q7Z398 422 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 CDRT4Q8N9R6 151 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 CHST4Q8NCG5 386 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 COL26A1Q96A83 441 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 RARRES2Q99969 163 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 MACROD1Q9BQ69 325 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 RTBDNQ9BSG5 229 aaPredicted RBP14.33□□□□□ -0.12
C9orf3-206ENST00000428313 CDH20Q9HBT6 801 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 PRR13Q9NZ81 148 aa14.33□□□□□ -0.12
C9orf3-206ENST00000428313 K7N7A8 449 aa14.32□□□□□ -0.12
C9orf3-206ENST00000428313 SLC17A1Q14916 467 aa14.32□□□□□ -0.12
C9orf3-206ENST00000428313 TXNDC8Q6A555 127 aa14.32□□□□□ -0.12
C9orf3-206ENST00000428313 AMZ2Q86W34 360 aa14.32□□□□□ -0.12
C9orf3-206ENST00000428313 LYPD6Q86Y78 171 aa14.32□□□□□ -0.12
C9orf3-206ENST00000428313 ZNF573Q86YE8 665 aa14.32□□□□□ -0.12
C9orf3-206ENST00000428313 FOXRED2Q8IWF2 684 aa14.32□□□□□ -0.12
C9orf3-206ENST00000428313 APCDD1LQ8NCL9 501 aa14.32□□□□□ -0.12
C9orf3-206ENST00000428313 RHBDD1Q8TEB9 315 aa14.32□□□□□ -0.12
C9orf3-206ENST00000428313 OR8B4Q96RC9 309 aa14.32□□□□□ -0.12
C9orf3-206ENST00000428313 NIPSNAP3BQ9BS92 247 aa14.32□□□□□ -0.12
C9orf3-206ENST00000428313 DNAJB12Q9NXW2 375 aaKnown RBP14.32□□□□□ -0.12
C9orf3-206ENST00000428313 RHBDD3Q9Y3P4 386 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms