RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 LIPHQ8WWY8 451 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 IL1F10Q8WWZ1 152 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 RAB33BQ9H082 229 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 IL20Q9NYY1 176 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF281Q9Y2X9 895 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 SPRY3O43610 288 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 LUMP51884 338 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 RAB1AP62820 205 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 SNTB1Q13884 538 aaKnown RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 EIF5AL1Q6IS14 154 aaKnown RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 RGS7BPQ6MZT1 257 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 MEX3BQ6ZN04 569 aaKnown RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 TTTY12Q9BZ98 90 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 NXF2Q9GZY0 626 aaKnown RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 HRH4Q9H3N8 390 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 CYB5R1Q9UHQ9 305 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 DOCK4Q8N1I0 1966 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 hCG_1809904A0A1W2PP81 198 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 A0A1W2PPE2 198 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 A0A1W2PR64 198 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 A0A1W2PRV1 198 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 DHHO43323 396 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF117Q03924 483 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 AVPI1Q5T686 147 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 AWAT2Q6E213 333 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 CORO6Q6QEF8 472 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 TMEM251Q8N6I4 163 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF441Q8N8Z8 693 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 HAVCR1Q96D42 359 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 RGCCQ9H4X1 137 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 C20orf141Q9NUB4 165 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 NAP1L6A6NFF2 107 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 C16orf97H3BN30 126 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 CDC42EP2O14613 210 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 OIP5O43482 229 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 NKX2-2O95096 273 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 HIST1H1CP16403 213 aaKnown RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 ATP1B3P54709 279 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 SUMO3P55854 103 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 RPL27P61353 136 aaKnown RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 SEC61A1P61619 476 aaKnown RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 HEPHL1Q6MZM0 1159 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 OR5D18Q8NGL1 313 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 OR1J1Q8NGS3 322 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 TMEM106AQ96A25 262 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 SLCO5A1Q9H2Y9 848 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 AUNIPQ9H7T9 357 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 TEX13DA0A0J9YY54 714 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 A0A1B0GUH1 482 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 LINC00862A6NCI5 91 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 HSPB6O14558 160 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 DNAJB6O75190 326 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 OR7C1O76099 320 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 SNAPINO95295 136 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 THBS1P07996 1170 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 UBBP0CG47 229 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 UBCP0CG48 685 aaKnown RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 FOSL1P15407 271 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 MSR1P21757 451 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 PTBP1P26599 531 aaKnown RBP eCLIP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 CD34P28906 385 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 ARF1P84077 181 aaKnown RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 LTBQ06643 244 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 HES1Q14469 280 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 UBE2NLQ5JXB2 153 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF684Q5T5D7 378 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 HACD4Q5VWC8 232 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 TIPARPQ7Z3E1 657 aaKnown RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 SUMF1Q8NBK3 374 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 OR52I2Q8NH67 350 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 SLC25A44Q96H78 314 aaPredicted RBP9.53□□□□□ -0.88
TCOF1-204ENST00000427724 CXorf58Q96LI9 332 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 FZR1Q9UM11 496 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 HHLA2Q9UM44 414 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 TIMM10BQ9Y5J6 103 aa9.53□□□□□ -0.88
TCOF1-204ENST00000427724 GPRIN2O60269 458 aa9.52□□□□□ -0.88
TCOF1-204ENST00000427724 CRTAPO75718 401 aaPredicted RBP9.52□□□□□ -0.88
TCOF1-204ENST00000427724 DEFA6Q01524 100 aa9.52□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF628Q5EBL2 1059 aa9.52□□□□□ -0.88
TCOF1-204ENST00000427724 RNASE10Q5GAN6 216 aaKnown RBP9.52□□□□□ -0.88
TCOF1-204ENST00000427724 TMEM244Q5VVB8 128 aa9.52□□□□□ -0.88
TCOF1-204ENST00000427724 H3F3CQ6NXT2 135 aa9.52□□□□□ -0.88
TCOF1-204ENST00000427724 TMEM52Q8NDY8 209 aa9.52□□□□□ -0.88
TCOF1-204ENST00000427724 AKR7LQ8NHP1 331 aa9.52□□□□□ -0.88
TCOF1-204ENST00000427724 PTPMT1Q8WUK0 201 aaPredicted RBP9.52□□□□□ -0.88
TCOF1-204ENST00000427724 ANKRD9Q96BM1 317 aaPredicted RBP9.52□□□□□ -0.88
TCOF1-204ENST00000427724 RNF170Q96K19 258 aa9.52□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF98A6NK75 572 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 RAB3DO95716 219 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 SRMP19623 302 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 OR8G1Q15617 311 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 ARTNQ5T4W7 220 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 ZNF770Q6IQ21 691 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-204ENST00000427724 WDSUB1Q8N9V3 476 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 RAB39BQ96DA2 213 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 DERL3Q96Q80 235 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 TAS2R8Q9NYW2 309 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 ZNF850A8MQ14 1090 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 ALG1L2C9J202 215 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 SCGB1D2O95969 90 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms