RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 RASSF4Q9H2L5 321 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 EFCAB1Q9HAE3 211 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 RAB18Q9NP72 206 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 KAAG1Q9UBP8 84 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 VPREB3Q9UKI3 123 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SAMD4AQ9UPU9 718 aaKnown RBP10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 SNX13Q9Y5W8 968 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 LHFPL6Q9Y693 200 aa10.15□□□□□ -0.78
HLA-DQB3-203ENST00000425319 A0A0U1RQK1 487 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 H3BUI4 141 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 FFAR1O14842 300 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 ARPC3O15145 178 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 XRCC2O43543 280 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 PPP1R3DO95685 299 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 MMP9P14780 707 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 CFL1P23528 166 aaKnown RBP10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 GNALP38405 381 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 HERPUD1Q15011 391 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 MEP1BQ16820 701 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OTPQ5XKR4 325 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 NCR3LG1Q68D85 454 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 HDXQ7Z353 690 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 DPY19L4Q7Z388 723 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 VMO1Q7Z5L0 202 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 C1QL4Q86Z23 238 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 LINC00346Q8IVM7 164 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 PDZD9Q8IXQ8 264 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR6V1Q8N148 313 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 SLC26A10Q8NG04 563 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 MED30Q96HR3 178 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 TSSK2Q96PF2 358 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 NMNAT3Q96T66 252 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 RPRD1BQ9NQG5 326 aaKnown RBP10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 ARGLU1Q9NWB6 273 aaPredicted RBP10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 RPUSD1Q9UJJ7 312 aaKnown RBP10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 N6AMT1Q9Y5N5 214 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 ARHGAP32A7KAX9 2087 aa10.14□□□□□ -0.79
HLA-DQB3-203ENST00000425319 FXYD1O00168 92 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 XPNPEP2O43895 674 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR10H3O60404 316 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 FUT4P22083 530 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 GABRA5P31644 462 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 GSK3BP49841 420 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 EMX1Q04741 257 aaPredicted RBP10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 SLC18B1Q6NT16 456 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 METAP1DQ6UB28 335 aaPredicted RBP10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 Q6ZSV7 163 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 PTCHD4Q6ZW05 846 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 NAA40Q86UY6 237 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 LNX2Q8N448 690 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 FAM86B1Q8N7N1 296 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR52L1Q8NGH7 329 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR2T4Q8NH00 348 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR4K13Q8NH42 304 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 FANK1Q8TC84 345 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 H1FXQ92522 213 aaKnown RBP10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 CLPTM1LQ96KA5 538 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 KCTD14Q9BQ13 255 aaPredicted RBP10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 COPS4Q9BT78 406 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 SAR1AQ9NR31 198 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 CENPMQ9NSP4 180 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 CTSZQ9UBR2 303 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 DNAJB11Q9UBS4 358 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 FBLN5Q9UBX5 448 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 CYB5R1Q9UHQ9 305 aa10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 SF3B6Q9Y3B4 125 aaKnown RBP10.13□□□□□ -0.79
HLA-DQB3-203ENST00000425319 A0A1W2PPH5 198 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 NKX6-3A6NJ46 265 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 ANXA2P2A6NMY6 339 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 RNASEK-C17orf49H0YIS7 233 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 NPFFO15130 113 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 TBX1O43435 398 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 CCDC22O60826 627 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 GLCEO94923 617 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 GADD45GO95257 159 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 PTBP3O95758 552 aaKnown RBP10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 PAICSP22234 425 aaKnown RBP10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OMPP47874 163 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 BLVRAP53004 296 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 ACSM1Q08AH1 577 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 TEX36Q5VZQ5 186 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 RPL13AP3Q6NVV1 102 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 CFAP77Q6ZQR2 320 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 C1orf122Q6ZSJ8 110 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 ZBTB46Q86UZ6 589 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 SLC15A3Q8IY34 581 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 PAPD5Q8NDF8 572 aaKnown RBP10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 PROKR2Q8NFJ6 384 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR4S1Q8NGB4 309 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR4C13Q8NGP0 309 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR9Q1Q8NGQ5 310 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR52J3Q8NH60 311 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR2T6Q8NHC8 308 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 C12orf43Q96C57 262 aaKnown RBP10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 HIST1H2AAQ96QV6 131 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 MICU1Q9BPX6 476 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 PPA2Q9H2U2 334 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR52D1Q9H346 318 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 TANC2Q9HCD6 1990 aa10.12□□□□□ -0.79
HLA-DQB3-203ENST00000425319 IGLV1-36A0A0B4J1U3 117 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms