RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ZNF230Q9UIE0 474 aaPredicted RBP9.46□□□□□ -0.9
CUX1-205ENST00000425244 FBXL2Q9UKC9 423 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 NXT1Q9UKK6 140 aaKnown RBP9.46□□□□□ -0.9
CUX1-205ENST00000425244 B3GALT5Q9Y2C3 310 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 PCDHGA1Q9Y5H4 931 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 ZNF208O43345 1280 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 ITGB2P05107 769 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 HSD11B1P28845 292 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 NOVA1P51513 510 aaKnown RBP9.46□□□□□ -0.9
CUX1-205ENST00000425244 SUMO3P55854 103 aaPredicted RBP9.46□□□□□ -0.9
CUX1-205ENST00000425244 GMFBP60983 142 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 SSBP1Q04837 148 aaKnown RBP9.46□□□□□ -0.9
CUX1-205ENST00000425244 MFAP5Q13361 173 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 SLC22A6Q4U2R8 563 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 PRAMEF20Q5VT98 475 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 OR52W1Q6IF63 320 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 CFAP77Q6ZQR2 320 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 TRAPPC6BQ86SZ2 158 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 GVQW1Q8N7I0 195 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 NKAIN3Q8N8D7 197 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 STEAP2Q8NFT2 490 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 OR5L2Q8NGL0 311 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 OR51E1Q8TCB6 317 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 SLC6A7Q99884 636 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 DEFB126Q9BYW3 111 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 C1orf198Q9H425 327 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 FAM206AQ9NX38 181 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 B3GAT1Q9P2W7 334 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 TCFL5Q9UL49 500 aa9.46□□□□□ -0.9
CUX1-205ENST00000425244 RPH3AQ9Y2J0 694 aaPredicted RBP9.46□□□□□ -0.9
CUX1-205ENST00000425244 SPENQ96T58 3664 aaKnown RBP9.45□□□□□ -0.9
CUX1-205ENST00000425244 SULT1C2O00338 296 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 PPP3CBP16298 524 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 DLSTP36957 453 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 MMP16P51512 607 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 GABREP78334 506 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 TGIF1Q15583 401 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 PCK2Q16822 640 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 PLPPR5Q32ZL2 321 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 LRRC37A5PQ49AS3 106 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 DMRTC1Q5HYR2 192 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 NHLRC3Q5JS37 347 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 C1orf100Q5SVJ3 147 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 ATPAF1Q5TC12 328 aaPredicted RBP9.45□□□□□ -0.9
CUX1-205ENST00000425244 IL22RA1Q8N6P7 574 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 OR1M1Q8NGA1 313 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 OR10S1Q8NGN2 331 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 CXorf58Q96LI9 332 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 MFFQ9GZY8 342 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 MYOTQ9UBF9 498 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 CYB5R1Q9UHQ9 305 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 NOP16Q9Y3C1 178 aaKnown RBP9.45□□□□□ -0.9
CUX1-205ENST00000425244 NSG1A0A0A6YYJ2 146 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 CCSO14618 274 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 LDLRAD4O15165 306 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 ZFAND5O76080 213 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 SPDEFO95238 335 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 PMS2P2O95744 297 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 GNB3P16520 340 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 ZNF20P17024 532 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 KLK2P20151 261 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 LAP3P28838 519 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 CXADRP78310 365 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 RNASE10Q5GAN6 216 aaKnown RBP9.45□□□□□ -0.9
CUX1-205ENST00000425244 AWAT2Q6E213 333 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 LIN54Q6MZP7 749 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 DEGS2Q6QHC5 323 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 GSG1LQ6UXU4 331 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 ABHD12BQ7Z5M8 362 aaPredicted RBP9.45□□□□□ -0.9
CUX1-205ENST00000425244 RTN4RL2Q86UN3 420 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 ZNF101Q8IZC7 436 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 OR2AJ1Q8NGZ0 328 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 OR6S1Q8NH40 331 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 POC1BQ8TC44 478 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 RBPMSQ93062 196 aaKnown RBP9.45□□□□□ -0.9
CUX1-205ENST00000425244 RBM14Q96PK6 669 aaKnown RBP9.45□□□□□ -0.9
CUX1-205ENST00000425244 SLC25A21Q9BQT8 299 aaPredicted RBP9.45□□□□□ -0.9
CUX1-205ENST00000425244 ZPBPQ9BS86 351 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 SOX7Q9BT81 388 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 PDCD10Q9BUL8 212 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 ASH2LQ9UBL3 628 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 WIF1Q9Y5W5 379 aa9.45□□□□□ -0.9
CUX1-205ENST00000425244 IGHV1-45A0A0A0MS14 117 aa9.44□□□□□ -0.9
CUX1-205ENST00000425244 ZNF814B7Z6K7 855 aa9.44□□□□□ -0.9
CUX1-205ENST00000425244 RAMP1O60894 148 aa9.44□□□□□ -0.9
CUX1-205ENST00000425244 ONECUT2O95948 504 aa9.44□□□□□ -0.9
CUX1-205ENST00000425244 IGHG1P01857 330 aa9.44□□□□□ -0.9
CUX1-205ENST00000425244 HLA-AP01891 365 aaKnown RBP9.44□□□□□ -0.9
CUX1-205ENST00000425244 SCRN3Q0VDG4 424 aa9.44□□□□□ -0.9
CUX1-205ENST00000425244 DHRS2Q13268 280 aa9.44□□□□□ -0.9
CUX1-205ENST00000425244 IKZF1Q13422 519 aa9.44□□□□□ -0.9
CUX1-205ENST00000425244 UNC119Q13432 240 aa9.44□□□□□ -0.9
CUX1-205ENST00000425244 ATXN7L3Q14CW9 347 aaPredicted RBP9.44□□□□□ -0.9
CUX1-205ENST00000425244 PCOLCEQ15113 449 aa9.44□□□□□ -0.9
CUX1-205ENST00000425244 TMEM176BQ3YBM2 270 aaPredicted RBP9.44□□□□□ -0.9
CUX1-205ENST00000425244 ZNF813Q6ZN06 617 aa9.44□□□□□ -0.9
CUX1-205ENST00000425244 RNF144BQ7Z419 303 aa9.44□□□□□ -0.9
CUX1-205ENST00000425244 BEST3Q8N1M1 668 aa9.44□□□□□ -0.9
CUX1-205ENST00000425244 OR4K17Q8NGC6 315 aa9.44□□□□□ -0.9
CUX1-205ENST00000425244 FAM71F1Q96KD3 344 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms