RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 QPRTQ15274 297 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 TAF1AQ15573 450 aaPredicted RBP2.38□□□□□ -2.03
LINC01040-201ENST00000425048 TRAM1Q15629 374 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 ZNHIT3Q15649 155 aaPredicted RBP2.38□□□□□ -2.03
LINC01040-201ENST00000425048 ACKR1Q16570 336 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 HAGHQ16775 308 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 IMPG1Q17R60 797 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 SLC5A12Q1EHB4 618 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 EXOC3L2Q2M3D2 409 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 HSDL1Q3SXM5 330 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 CHRFAM7AQ494W8 412 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 CDNFQ49AH0 187 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 SLC39A12Q504Y0 691 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 ACTBL2Q562R1 376 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 C10orf91Q5T1B1 145 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 ANKRD22Q5VYY1 191 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 FBXW9Q5XUX1 488 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 SAXO2Q658L1 398 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 TNS3Q68CZ2 1445 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 GLYATQ6IB77 296 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 LCN8Q6JVE9 175 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 PRR5LQ6MZQ0 368 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 STEAP1BQ6NZ63 245 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 IGFL1Q6UW32 110 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 CES3Q6UWW8 571 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 TMEM107Q6UX40 140 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 HACD2Q6Y1H2 254 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 ADAMTSL5Q6ZMM2 481 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 SPATA19Q7Z5L4 167 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 LHFPL4Q7Z7J7 247 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 DHFR2Q86XF0 187 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 SKA3Q8IX90 412 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 AQP12AQ8IXF9 295 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 C8orf59Q8N0T1 100 aaPredicted RBP2.38□□□□□ -2.03
LINC01040-201ENST00000425048 STX19Q8N4C7 294 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 ATPAF2Q8N5M1 289 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 C10orf53Q8N6V4 93 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 OR10A7Q8NGE5 316 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 OR2L8Q8NGY9 312 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 RXFP4Q8TDU9 374 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 ST7LQ8TDW4 575 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 MAFIPQ8WZ33 124 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 RORBQ92753 470 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 DNASE1L2Q92874 299 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 SLC38A4Q969I6 547 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 OTUB2Q96DC9 234 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 TCEAL4Q96EI5 215 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 FAM210BQ96KR6 192 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 SENP8Q96LD8 212 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 AMDHD1Q96NU7 426 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 ABCA3Q99758 1704 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 SLC30A2Q9BRI3 323 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 TMEM175Q9BSA9 504 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 MARVELD1Q9BSK0 173 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 FEM1AQ9BSK4 669 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 FTHL17Q9BXU8 183 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 NFKBIZQ9BYH8 718 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 TOLLIPQ9H0E2 274 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 OR51J1Q9H342 316 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 GAL3ST2Q9H3Q3 398 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 GLIPR2Q9H4G4 154 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 FOLH1BQ9HBA9 442 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 TREM1Q9NP99 234 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 LHX9Q9NQ69 397 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 DAZ3Q9NR90 486 aaKnown RBP2.38□□□□□ -2.03
LINC01040-201ENST00000425048 IMP3Q9NV31 184 aaKnown RBP2.38□□□□□ -2.03
LINC01040-201ENST00000425048 NKIRAS2Q9NYR9 191 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 USE1Q9NZ43 259 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 VAPAQ9P0L0 249 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 AKAP7Q9P0M2 348 aaPredicted RBP2.38□□□□□ -2.03
LINC01040-201ENST00000425048 OR12D3Q9UGF7 316 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 ING4Q9UNL4 249 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 ERVW-1Q9UQF0 538 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 STARD10Q9Y365 291 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 GOLT1BQ9Y3E0 138 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 POLR3HQ9Y535 204 aaPredicted RBP2.38□□□□□ -2.03
LINC01040-201ENST00000425048 COL14A1Q05707 1796 aaKnown RBP2.38□□□□□ -2.03
LINC01040-201ENST00000425048 STRCQ7RTU9 1775 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 AHDC1Q5TGY3 1603 aaPredicted RBP2.38□□□□□ -2.03
LINC01040-201ENST00000425048 PXDNQ92626 1479 aa2.38□□□□□ -2.03
LINC01040-201ENST00000425048 ADAMTS7Q9UKP4 1686 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 DUOX1Q9NRD9 1551 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 ANKRD12Q6UB98 2062 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 A0A087X0K7 114 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 GLYATL1P3A0A0U1RQE8 302 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 LOC100506127A0A0U1RQW1 187 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 RNF103-CHMP3A0A140T963 221 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 DHRS12A0PJE2 317 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 YJEFN3A6XGL0 299 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 COLCA2A8K830 154 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 D6RAR5 112 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 M0QZK8 103 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 NME4O00746 187 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 PRMT5O14744 637 aaPredicted RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 CACNG3O60359 315 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 PLIN3O60664 434 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 KERAO60938 352 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 SDC3O75056 442 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 VPS26AO75436 327 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 SUPT7LO94864 414 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms