RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 SLC25A28Q96A46 364 aa8.82□□□□□ -1
USP54-205ENST00000424265 MALSU1Q96EH3 234 aa8.82□□□□□ -1
USP54-205ENST00000424265 SLC25A31Q9H0C2 315 aa8.82□□□□□ -1
USP54-205ENST00000424265 OR10A5Q9H207 317 aa8.82□□□□□ -1
USP54-205ENST00000424265 NPDC1Q9NQX5 325 aaPredicted RBP8.82□□□□□ -1
USP54-205ENST00000424265 PIPOXQ9P0Z9 390 aa8.82□□□□□ -1
USP54-205ENST00000424265 A0A1W2PR48 441 aa8.82□□□□□ -1
USP54-205ENST00000424265 OR2M5A3KFT3 312 aa8.82□□□□□ -1
USP54-205ENST00000424265 ZNF208O43345 1280 aa8.82□□□□□ -1
USP54-205ENST00000424265 IFI6P09912 130 aa8.82□□□□□ -1
USP54-205ENST00000424265 FGF9P31371 208 aaPredicted RBP8.82□□□□□ -1
USP54-205ENST00000424265 SNCAP37840 140 aa8.82□□□□□ -1
USP54-205ENST00000424265 OR1E2P47887 323 aa8.82□□□□□ -1
USP54-205ENST00000424265 SRSF3P84103 164 aaKnown RBP8.82□□□□□ -1
USP54-205ENST00000424265 PDE7AQ13946 482 aa8.82□□□□□ -1
USP54-205ENST00000424265 KRTCAP3Q53RY4 240 aa8.82□□□□□ -1
USP54-205ENST00000424265 CBLL1Q75N03 491 aa8.82□□□□□ -1
USP54-205ENST00000424265 RNF175Q8N4F7 328 aa8.82□□□□□ -1
USP54-205ENST00000424265 OR5D18Q8NGL1 313 aa8.82□□□□□ -1
USP54-205ENST00000424265 OR1L6Q8NGR2 347 aa8.82□□□□□ -1
USP54-205ENST00000424265 STT3BQ8TCJ2 826 aa8.82□□□□□ -1
USP54-205ENST00000424265 REEP6Q96HR9 211 aa8.82□□□□□ -1
USP54-205ENST00000424265 OR7D2Q96RA2 312 aa8.82□□□□□ -1
USP54-205ENST00000424265 TRIM36Q9NQ86 728 aa8.82□□□□□ -1
USP54-205ENST00000424265 IL20RAQ9UHF4 553 aa8.82□□□□□ -1
USP54-205ENST00000424265 LHX6Q9UPM6 363 aa8.82□□□□□ -1
USP54-205ENST00000424265 HIF3AQ9Y2N7 669 aa8.82□□□□□ -1
USP54-205ENST00000424265 IGHV5-51A0A0C4DH38 117 aa8.82□□□□□ -1
USP54-205ENST00000424265 EEF1E1-BLOC1S5C9J1V9 151 aa8.82□□□□□ -1
USP54-205ENST00000424265 XKRYO14609 159 aa8.82□□□□□ -1
USP54-205ENST00000424265 TMPRSS11DO60235 418 aa8.82□□□□□ -1
USP54-205ENST00000424265 OR5AC1P0C628 307 aa8.82□□□□□ -1
USP54-205ENST00000424265 BTCP35070 178 aa8.82□□□□□ -1
USP54-205ENST00000424265 SLC22A6Q4U2R8 563 aa8.82□□□□□ -1
USP54-205ENST00000424265 SOHLH1Q5JUK2 328 aa8.82□□□□□ -1
USP54-205ENST00000424265 COMMD1Q8N668 190 aa8.82□□□□□ -1
USP54-205ENST00000424265 ABHD1Q96SE0 405 aa8.82□□□□□ -1
USP54-205ENST00000424265 OR2J1Q9GZK6 312 aa8.82□□□□□ -1
USP54-205ENST00000424265 AUNIPQ9H7T9 357 aa8.82□□□□□ -1
USP54-205ENST00000424265 KCNG2Q9UJ96 466 aa8.82□□□□□ -1
USP54-205ENST00000424265 ZNF346Q9UL40 294 aaKnown RBP8.82□□□□□ -1
USP54-205ENST00000424265 NKX6-3A6NJ46 265 aa8.81□□□□□ -1
USP54-205ENST00000424265 RIIAD1A6NNX1 92 aa8.81□□□□□ -1
USP54-205ENST00000424265 DOK2O60496 412 aa8.81□□□□□ -1
USP54-205ENST00000424265 OR2A4O95047 310 aa8.81□□□□□ -1
USP54-205ENST00000424265 OR13C7P0DN81 318 aa8.81□□□□□ -1
USP54-205ENST00000424265 PNMTP11086 282 aa8.81□□□□□ -1
USP54-205ENST00000424265 CAMLGP49069 296 aa8.81□□□□□ -1
USP54-205ENST00000424265 SLC25A45Q8N413 288 aa8.81□□□□□ -1
USP54-205ENST00000424265 ZNF433Q8N7K0 673 aaPredicted RBP8.81□□□□□ -1
USP54-205ENST00000424265 OR1J2Q8NGS2 313 aa8.81□□□□□ -1
USP54-205ENST00000424265 SNX22Q96L94 193 aa8.81□□□□□ -1
USP54-205ENST00000424265 OR2A7Q96R45 310 aa8.81□□□□□ -1
USP54-205ENST00000424265 SLC25A19Q9HC21 320 aa8.81□□□□□ -1
USP54-205ENST00000424265 C5AR2Q9P296 337 aa8.81□□□□□ -1
USP54-205ENST00000424265 POMT1Q9Y6A1 747 aa8.81□□□□□ -1
USP54-205ENST00000424265 DENND4AQ7Z401 1863 aa8.81□□□□□ -1
USP54-205ENST00000424265 OSMP13725 252 aa8.81□□□□□ -1
USP54-205ENST00000424265 CD22P20273 847 aa8.81□□□□□ -1
USP54-205ENST00000424265 ACP1P24666 158 aa8.81□□□□□ -1
USP54-205ENST00000424265 SELENOWP63302 87 aa8.81□□□□□ -1
USP54-205ENST00000424265 TSPAN31Q12999 210 aa8.81□□□□□ -1
USP54-205ENST00000424265 TPBGQ13641 420 aa8.81□□□□□ -1
USP54-205ENST00000424265 PCGF3Q3KNV8 242 aa8.81□□□□□ -1
USP54-205ENST00000424265 FAM219BQ5XKK7 198 aa8.81□□□□□ -1
USP54-205ENST00000424265 RTL6Q6ICC9 239 aa8.81□□□□□ -1
USP54-205ENST00000424265 C11orf87Q6NUJ2 197 aa8.81□□□□□ -1
USP54-205ENST00000424265 SMARCD3Q6STE5 483 aa8.81□□□□□ -1
USP54-205ENST00000424265 C1orf122Q6ZSJ8 110 aa8.81□□□□□ -1
USP54-205ENST00000424265 KCTD9Q7L273 389 aa8.81□□□□□ -1
USP54-205ENST00000424265 VN1R4Q7Z5H5 301 aa8.81□□□□□ -1
USP54-205ENST00000424265 ACBD7Q8N6N7 88 aa8.81□□□□□ -1
USP54-205ENST00000424265 DEFB124Q8NES8 71 aa8.81□□□□□ -1
USP54-205ENST00000424265 OR11A1Q9GZK7 315 aa8.81□□□□□ -1
USP54-205ENST00000424265 CLDN16Q9Y5I7 305 aa8.81□□□□□ -1
USP54-205ENST00000424265 J3QW42 95 aa8.81□□□□□ -1
USP54-205ENST00000424265 CTSVO60911 334 aa8.81□□□□□ -1
USP54-205ENST00000424265 TOX4O94842 621 aa8.81□□□□□ -1
USP54-205ENST00000424265 MVDP53602 400 aa8.81□□□□□ -1
USP54-205ENST00000424265 SNRPGP62308 76 aaKnown RBP8.81□□□□□ -1
USP54-205ENST00000424265 CDK5Q00535 292 aa8.81□□□□□ -1
USP54-205ENST00000424265 PRTGQ2VWP7 1150 aa8.81□□□□□ -1
USP54-205ENST00000424265 EXOSC6Q5RKV6 272 aaKnown RBP8.81□□□□□ -1
USP54-205ENST00000424265 MFSD12Q6NUT3 480 aa8.81□□□□□ -1
USP54-205ENST00000424265 TMPRSS12Q86WS5 348 aa8.81□□□□□ -1
USP54-205ENST00000424265 SLC30A7Q8NEW0 376 aa8.81□□□□□ -1
USP54-205ENST00000424265 JSRP1Q96MG2 331 aaPredicted RBP8.81□□□□□ -1
USP54-205ENST00000424265 SOSTQ9BQB4 213 aa8.81□□□□□ -1
USP54-205ENST00000424265 ZNF552Q9H707 407 aaPredicted RBP8.81□□□□□ -1
USP54-205ENST00000424265 ABRACLQ9P1F3 81 aa8.81□□□□□ -1
USP54-205ENST00000424265 MEMO1Q9Y316 297 aa8.81□□□□□ -1
USP54-205ENST00000424265 UNC119BA6NIH7 251 aa8.81□□□□□ -1
USP54-205ENST00000424265 IDSB3KWA1 339 aa8.81□□□□□ -1
USP54-205ENST00000424265 C21orf140B9A014 251 aa8.81□□□□□ -1
USP54-205ENST00000424265 TNFSF15O95150 251 aa8.81□□□□□ -1
USP54-205ENST00000424265 APLNRP35414 380 aa8.81□□□□□ -1
USP54-205ENST00000424265 FGF8P55075 233 aaPredicted RBP8.81□□□□□ -1
USP54-205ENST00000424265 RAB40BQ12829 278 aa8.81□□□□□ -1
USP54-205ENST00000424265 ZNF345Q14585 488 aa8.81□□□□□ -1
USP54-205ENST00000424265 LINC00303Q3SY05 128 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms