RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 BHLHE23Q8NDY6 225 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 ASH2LQ9UBL3 628 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 PI4KAP42356 2102 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 TMEM14DPA8MWL7 114 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 HEXBP07686 556 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 GIMD1P0DJR0 217 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 NPY4RP50391 375 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 ARMC10Q8N2F6 343 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 INO80EQ8NBZ0 244 aaPredicted RBP13.99□□□□□ -0.17
CDH1-202ENST00000422392 NFAM1Q8NET5 270 aaPredicted RBP13.99□□□□□ -0.17
CDH1-202ENST00000422392 OR10G3Q8NGC4 313 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 OR8B12Q8NGG6 310 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 OR5D18Q8NGL1 313 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 WNT2BQ93097 391 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 MRPL13Q9BYD1 178 aaKnown RBP13.99□□□□□ -0.17
CDH1-202ENST00000422392 GPR84Q9NQS5 396 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 ALKBH4Q9NXW9 302 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 PPP4R1LQ9P1A2 415 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 GLS2Q9UI32 602 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 PCDHB10Q9UN67 800 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 RPH3AQ9Y2J0 694 aaPredicted RBP13.99□□□□□ -0.17
CDH1-202ENST00000422392 CSAG2Q9Y5P2 127 aa13.99□□□□□ -0.17
CDH1-202ENST00000422392 C5orf63A6NC05 138 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 MPTX1A8MV57 137 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 DNASE2O00115 360 aaPredicted RBP13.98□□□□□ -0.17
CDH1-202ENST00000422392 RAD51DO75771 328 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 TSPAN9O75954 239 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 SFTPDP35247 375 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 ZNF121P58317 390 aaPredicted RBP13.98□□□□□ -0.17
CDH1-202ENST00000422392 PAN3Q58A45 887 aaKnown RBP13.98□□□□□ -0.17
CDH1-202ENST00000422392 OR5AS1Q8N127 324 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 POC1BQ8TC44 478 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 UQCC2Q9BRT2 126 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 ASF1BQ9NVP2 202 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 B3GALT5Q9Y2C3 310 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 MRPS28Q9Y2Q9 187 aaKnown RBP13.98□□□□□ -0.17
CDH1-202ENST00000422392 E9PLN8 166 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 ZNF208O43345 1280 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 GP1BAP07359 652 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 ZNF41P51814 821 aaPredicted RBP13.98□□□□□ -0.17
CDH1-202ENST00000422392 TMEM50BP56557 158 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 SLC9A3R2Q15599 337 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 NPRL2Q8WTW4 380 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 MAFIPQ8WZ33 124 aa13.98□□□□□ -0.17
CDH1-202ENST00000422392 C1orf147Q96MC9 270 aaPredicted RBP13.98□□□□□ -0.17
CDH1-202ENST00000422392 CHMP1AQ9HD42 196 aaPredicted RBP13.98□□□□□ -0.17
CDH1-202ENST00000422392 ADAP1O75689 374 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 CRHP06850 196 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 HCKP08631 526 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 PGA4P0DJD7 388 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 PGA3P0DJD8 388 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 GLB1P16278 677 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 ZNF17P17021 662 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 HLA-GP17693 338 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 RSPO4Q2I0M5 234 aaPredicted RBP13.97□□□□□ -0.17
CDH1-202ENST00000422392 PLPPR5Q32ZL2 321 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 ZNF529Q6P280 563 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 UEVLDQ8IX04 471 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 OR2AJ1Q8NGZ0 328 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 DCUN1D4Q92564 292 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 RRNAD1Q96FB5 475 aaKnown RBP13.97□□□□□ -0.17
CDH1-202ENST00000422392 OR5B2Q96R09 309 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 FAM117AQ9C073 453 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 CACNA1EQ15878 2313 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 DUS4LO95620 317 aaKnown RBP13.97□□□□□ -0.17
CDH1-202ENST00000422392 FAM122CQ6P4D5 195 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 NAA40Q86UY6 237 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 HOGA1Q86XE5 327 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 OR6S1Q8NH40 331 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 RAB3CQ96E17 227 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 ARPC5LQ9BPX5 153 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 C5orf66Q9H5L9 145 aa13.97□□□□□ -0.17
CDH1-202ENST00000422392 MUC3AQ02505 3323 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 ZNF878C9JN71 531 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 CDC14BO60729 498 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 OR2J2O76002 312 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 MPZP25189 248 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 PSMB6P28072 239 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 SMAD4Q13485 552 aaKnown RBP13.96□□□□□ -0.17
CDH1-202ENST00000422392 ZNF574Q6ZN55 896 aaPredicted RBP13.96□□□□□ -0.17
CDH1-202ENST00000422392 FAM57BQ71RH2 274 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 NOXO1Q8NFA2 376 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 OR4K17Q8NGC6 315 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 OR5AP2Q8NGF4 316 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 TMEM230Q96A57 120 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 ARHGAP5-AS1Q96IT6 56 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 GPER1Q99527 375 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 ADAT1Q9BUB4 502 aaKnown RBP13.96□□□□□ -0.17
CDH1-202ENST00000422392 METTL7AQ9H8H3 244 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 KLHL13Q9P2N7 655 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 A0A0B4J2A0 478 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 A0A1B0GW55 424 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 DBX1A6NMT0 343 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 H0YIZ8 118 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 SDCBPO00560 298 aaPredicted RBP13.96□□□□□ -0.17
CDH1-202ENST00000422392 CRTAPO75718 401 aaPredicted RBP13.96□□□□□ -0.17
CDH1-202ENST00000422392 HTR3BO95264 441 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 DUX4L2P0CJ85 424 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 DUX4L3P0CJ86 424 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 DUX4L4P0CJ87 422 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms