RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 ANXA2P2A6NMY6 339 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 B8ZZF3 427 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 J3QW42 95 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 M0R1B8 84 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 DHRS3O75911 302 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 OCMP0CE72 109 aaPredicted RBP14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 PPP3CBP16298 524 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 SRMP19623 302 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 RAB3BP20337 219 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 CCL1P22362 96 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 RPS19P39019 145 aaKnown RBP14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 ZNF83P51522 516 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 ADORA2A-AS1P86434 159 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 IGFBP7Q16270 282 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 GLYATL3Q5SZD4 288 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 MRPL21Q7Z2W9 205 aaKnown RBP14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 FGGYQ96C11 551 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 OPA3Q9H6K4 179 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 ZNF319Q9P2F9 582 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 RTTNQ86VV8 2226 aa14.84□□□□□ -0.03
CCDC28B-202ENST00000421922 A0A1B0GTI1 187 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 SMIM30A4D0T7 59 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 CECR9P0C854 216 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 MAP2K3P46734 347 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 UQCRFS1P47985 274 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 TAB1Q15750 504 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 CROCCP3Q8IVE0 287 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 SERPINA12Q8IW75 414 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 AP3S1Q92572 193 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 SLC25A46Q96AG3 418 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 SGK3Q96BR1 496 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 ZNF75AQ96N20 296 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 TSC22D3Q99576 134 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 OR51B6Q9H340 312 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 KCNJ16Q9NPI9 418 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 TBCCD1Q9NVR7 557 aa14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 CRNNQ9UBG3 495 aaPredicted RBP14.83□□□□□ -0.03
CCDC28B-202ENST00000421922 CLEC2LP0C7M8 214 aa14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 FSTP19883 344 aa14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 C3orf36Q3SXR2 165 aa14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 COLCA1Q6ZS62 124 aa14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 SEMA6DQ8NFY4 1073 aa14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 OR5D14Q8NGL3 314 aa14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 LILRB4Q8NHJ6 448 aa14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 MCFD2Q8NI22 146 aa14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 RNASE6Q93091 150 aaKnown RBP14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 LYZL4Q96KX0 146 aa14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 PPIL3Q9H2H8 161 aaKnown RBP14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 NGBQ9NPG2 151 aa14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 TAS2R4Q9NYW5 299 aa14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 PTTG3PQ9NZH4 202 aa14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 FOXJ3Q9UPW0 622 aa14.83□□□□□ -0.04
CCDC28B-202ENST00000421922 DIDO1Q9BTC0 2240 aaKnown RBP14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 IGHV1-18A0A0C4DH31 117 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 LOC390937A0A1W2PQ73 354 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 C5orf63A6NC05 138 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 DHRS7CA6NNS2 312 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 PIN1P1O15428 100 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 IGLV1-44P01699 117 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 MAS1P04201 325 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 CCKARP32238 428 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 THBS4P35443 961 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 PSMD7P51665 324 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 RIPPLY1Q0D2K3 151 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 ZNF404Q494X3 552 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 CEP78Q5JTW2 689 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 PGAP1Q75T13 922 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 MYPOPQ86VE0 399 aaPredicted RBP14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 WFDC8Q8IUA0 241 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 PAQR4Q8N4S7 273 aaPredicted RBP14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 C10orf35Q96D05 121 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 ORAI1Q96D31 301 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 NEK6Q9HC98 313 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 PIGLQ9Y2B2 252 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 SPEF1Q9Y4P9 236 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 V9GYS6 101 aa14.82□□□□□ -0.04
CCDC28B-202ENST00000421922 NKX2-6A6NCS4 301 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 GGT3PA6NGU5 568 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 MAGEB3O15480 346 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 LMX1BO60663 402 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 NCR1O76036 304 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 IGLV3-1P01715 115 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 CRYAAP02489 173 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 ERCC1P07992 297 aaPredicted RBP14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 FAM157BP0CG42 384 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 WNT5AP41221 380 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 RAD52P43351 418 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 ZNF92Q03936 586 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 FBXL19-AS1Q494R0 122 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 RFPL4BQ6ZWI9 263 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 FTMTQ8N4E7 242 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 PARP16Q8N5Y8 322 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 PLPP7Q8NBV4 271 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 OR14K1Q8NGZ2 314 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 PP6455Q8WZ26 134 aa14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 ZC3HAV1LQ96H79 300 aaKnown RBP14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 C6orf62Q9GZU0 229 aaPredicted RBP14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 AK6Q9Y3D8 172 aaKnown RBP14.81□□□□□ -0.04
CCDC28B-202ENST00000421922 HEATR1Q9H583 2144 aaKnown RBP14.8□□□□□ -0.04
CCDC28B-202ENST00000421922 hCG_38984A0A1B0GV85 526 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms