RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ZNF101Q8IZC7 436 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 IRF7Q92985 503 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 IGSF21Q96ID5 467 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 CDCA3Q99618 268 aaPredicted RBP7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 PIAS3Q9Y6X2 628 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF727A8MUV8 499 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 HOXA2O43364 376 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 GMFGO60234 142 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 RAB4AP20338 218 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 S1PR1P21453 382 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 CXCR1P25024 350 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 TLX1P31314 330 aaPredicted RBP7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 FHITP49789 147 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 NPY4RP50391 375 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 ADPRHP54922 357 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 ERVFRD-1P60508 538 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 TNFRSF9Q07011 255 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 MFGE8Q08431 387 aaPredicted RBP7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 ANKRD39Q53RE8 183 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 EMC4Q5J8M3 183 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 VAX1Q5SQQ9 334 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF343Q6P1L6 599 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 TMEM184AQ6ZMB5 413 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 ERN2Q76MJ5 926 aaKnown RBP7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 PEG10Q86TG7 708 aaKnown RBP7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 SUMF2Q8NBJ7 301 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 SLC46A2Q9BY10 475 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 HS3ST3B1Q9Y662 390 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 IGKV1D-42A0A075B6H8 117 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 A0A1W2PRU2 124 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 TRGC2P03986 189 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 PEBP1P30086 187 aaKnown RBP7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 UNC119Q13432 240 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 RUNX2Q13950 521 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 C21orf62-AS1Q17RA5 79 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 PRICKLE4Q2TBC4 344 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 OR2T2Q6IF00 324 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 ADAMTSL4Q6UY14 1074 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 NPSR1Q6W5P4 371 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 RNF44Q7L0R7 432 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 NKAIN3Q8N8D7 197 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 SEMA6DQ8NFY4 1073 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 HPSE2Q8WWQ2 592 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 RTBDNQ9BSG5 229 aaPredicted RBP7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 SMIM3Q9BZL3 60 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 GRHPRQ9UBQ7 328 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 DAPP1Q9UN19 280 aa7.15□□□□□ -1.26
HMGXB4-202ENST00000418170 COL4A2P08572 1712 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 SMCO3A2RU48 225 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 C9J4A7 227 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 MASP2O00187 686 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 GNB3P16520 340 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 PI3P19957 117 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 FGF7P21781 194 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 FPR2P25090 351 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 ZNF74Q16587 644 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 HIKESHIQ53FT3 197 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 AKR1C8PQ5T2L2 129 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 SLC35D2Q76EJ3 337 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 DCXRQ7Z4W1 244 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 TMEM104Q8NE00 496 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 LFNGQ8NES3 379 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 LIPHQ8WWY8 451 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 HOXB13Q92826 284 aaPredicted RBP7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 ARRDC3Q96B67 414 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 RAB39BQ96DA2 213 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 MOGAT1Q96PD6 335 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 SERINC2Q96SA4 455 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 HIST1H2BLQ99880 126 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 NELFAQ9H3P2 528 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 STRAPQ9Y3F4 350 aaKnown RBP7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 SLCO1B1Q9Y6L6 691 aa7.15□□□□□ -1.27
HMGXB4-202ENST00000418170 CCDC187A0A096LP49 1063 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 DEDDO75618 318 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 RENP00797 406 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 TIMP1P01033 207 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 PRNPP04156 253 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 SOD2P04179 222 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 HEXBP07686 556 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 SPARCP09486 303 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 RPS2P15880 293 aaKnown RBP7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 CMPK1P30085 196 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 DNASE1L1P49184 302 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 CLDN6P56747 220 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 ROM1Q03395 351 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 JOSD1Q15040 202 aaPredicted RBP7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 DEFB134Q4QY38 66 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 Q7L0L9 218 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 C5orf24Q7Z6I8 188 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 CATSPERDQ86XM0 798 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 OR52E1Q8NGJ3 308 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 TSPAN32Q96QS1 320 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 NUDT16L1Q9BRJ7 211 aaKnown RBP7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 TMEM74BQ9NUR3 256 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 B9D1Q9UPM9 204 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 COL6A3P12111 3177 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 ALPK2Q86TB3 2170 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 ARID1AO14497 2285 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 GRXCR1A8MXD5 290 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms