RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 MRPS26Q9BYN8 205 aaKnown RBP7.28□□□□□ -1.24
TRIM48-201ENST00000417545 ACOT13Q9NPJ3 140 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 TAAR3PQ9P1P4 343 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 FBXO9Q9UK97 447 aaPredicted RBP7.28□□□□□ -1.24
TRIM48-201ENST00000417545 HHLA2Q9UM44 414 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 DHDHQ9UQ10 334 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 NOP16Q9Y3C1 178 aaKnown RBP7.28□□□□□ -1.24
TRIM48-201ENST00000417545 PMF1-BGLAPU3KQ54 211 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 DOPEY1Q5JWR5 2465 aa7.28□□□□□ -1.24
TRIM48-201ENST00000417545 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.27□□□□□ -1.24
TRIM48-201ENST00000417545 B9A039 149 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 M0R233 179 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 DHRS3O75911 302 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 TTRP02766 147 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 CD2P06729 351 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 ADRA2AP08913 450 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 ACHEP22303 614 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 TNFSF4P23510 183 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 MPV17P39210 176 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 ZNF92Q03936 586 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 EMX1Q04741 257 aaPredicted RBP7.27□□□□□ -1.24
TRIM48-201ENST00000417545 MLLT11Q13015 90 aaPredicted RBP7.27□□□□□ -1.24
TRIM48-201ENST00000417545 IRF3Q14653 427 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 ADIPOQQ15848 244 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 TSTQ16762 297 aaKnown RBP7.27□□□□□ -1.24
TRIM48-201ENST00000417545 RSPO1Q2MKA7 263 aaPredicted RBP7.27□□□□□ -1.24
TRIM48-201ENST00000417545 MBNL2Q5VZF2 373 aaKnown RBP7.27□□□□□ -1.24
TRIM48-201ENST00000417545 HIST2H2BCQ6DN03 193 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 OR2T2Q6IF00 324 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 FDX2Q6P4F2 183 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 COLCA1Q6ZS62 124 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 PRSS35Q8N3Z0 413 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 ACBD4Q8NC06 268 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 OR8S1Q8NH09 359 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 THRSPQ92748 146 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 SMIM19Q96E16 107 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 MARS2Q96GW9 593 aaKnown RBP7.27□□□□□ -1.24
TRIM48-201ENST00000417545 HIST1H2AAQ96QV6 131 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 OR5M11Q96RB7 305 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 MGLLQ99685 303 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 CCL19Q99731 98 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 VRK1Q99986 396 aaPredicted RBP7.27□□□□□ -1.24
TRIM48-201ENST00000417545 PAPOLGQ9BWT3 736 aaKnown RBP7.27□□□□□ -1.24
TRIM48-201ENST00000417545 MRPL37Q9BZE1 423 aaKnown RBP7.27□□□□□ -1.24
TRIM48-201ENST00000417545 POFUT1Q9H488 388 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 NEK6Q9HC98 313 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 ISYNA1Q9NPH2 558 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 G6PC2Q9NQR9 355 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 CYSLTR2Q9NS75 346 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 NKIRAS2Q9NYR9 191 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 FRRS1LQ9P0K9 344 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 CGGBP1Q9UFW8 167 aaPredicted RBP7.27□□□□□ -1.24
TRIM48-201ENST00000417545 SCOCQ9UIL1 159 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 ENPP5Q9UJA9 477 aa7.27□□□□□ -1.24
TRIM48-201ENST00000417545 PURGQ9UJV8 347 aaKnown RBP7.27□□□□□ -1.24
TRIM48-201ENST00000417545 DOPEY2Q9Y3R5 2298 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 ANXA2P2A6NMY6 339 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 E9PI62 339 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 SRSF10O75494 262 aaKnown RBP7.27□□□□□ -1.25
TRIM48-201ENST00000417545 CLPTM1O96005 669 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 SERPINA3P01011 423 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 ZNF250P15622 560 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 MAPK3P27361 379 aaPredicted RBP7.27□□□□□ -1.25
TRIM48-201ENST00000417545 LOXP28300 417 aaPredicted RBP7.27□□□□□ -1.25
TRIM48-201ENST00000417545 TTKP33981 857 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 LIPAP38571 399 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 DDOSTP39656 456 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 KIR3DL2P43630 455 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 SOX2P48431 317 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 GSK3AP49840 483 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 PRSS12P56730 875 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 NANOS3P60323 173 aaKnown RBP7.27□□□□□ -1.25
TRIM48-201ENST00000417545 MZT1Q08AG7 82 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 RIPPLY1Q0D2K3 151 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 OR8G1Q15617 311 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 TRAM1Q15629 374 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 ARMCX4Q5H9R4 360 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 LIPKQ5VXJ0 399 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 FBXW12Q6X9E4 464 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 ZNF611Q8N823 705 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 OR56B2PQ8NGI1 322 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 GPR148Q8TDV2 347 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 PIGCQ92535 297 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 PPP1R14AQ96A00 147 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 SGK3Q96BR1 496 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 PDCD1LG2Q9BQ51 273 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 ZNF649Q9BS31 505 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 ADAT1Q9BUB4 502 aaKnown RBP7.27□□□□□ -1.25
TRIM48-201ENST00000417545 TMED9Q9BVK6 235 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 CBLN4Q9NTU7 201 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 CKLFQ9UBR5 152 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 ST6GALNAC2Q9UJ37 374 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 LAMP3Q9UQV4 416 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 PIGLQ9Y2B2 252 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 ZNF281Q9Y2X9 895 aa7.27□□□□□ -1.25
TRIM48-201ENST00000417545 ANKHD1Q8IWZ3 2542 aaKnown RBP7.26□□□□□ -1.25
TRIM48-201ENST00000417545 PRR14LQ5THK1 2151 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 ZNF816-ZNF321PA0A0X1KG74 233 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 hCG_38984A0A1B0GV85 526 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 OR4C45A6NMZ5 311 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms