RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 IFNGR2P38484 337 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 SRP9P49458 86 aaKnown RBP11.34□□□□□ -0.59
SSB-204ENST00000417292 HMGA2P52926 109 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 COX10Q12887 443 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 TRAP1Q12931 704 aaKnown RBP11.34□□□□□ -0.59
SSB-204ENST00000417292 SLC35F1Q5T1Q4 408 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 OR2T5Q6IEZ7 315 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 OR2T2Q6IF00 324 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.34□□□□□ -0.59
SSB-204ENST00000417292 SPATA24Q86W54 205 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 PDZD9Q8IXQ8 264 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 AQP11Q8NBQ7 271 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 OR2T29Q8NH02 315 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 OR4K13Q8NH42 304 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 SLC7A6Q92536 515 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 TECTBQ96PL2 329 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 GPX7Q96SL4 187 aaPredicted RBP11.34□□□□□ -0.59
SSB-204ENST00000417292 NUAK2Q9H093 628 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 SEMA6AQ9H2E6 1030 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 DPAGT1Q9H3H5 408 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 NECAP2Q9NVZ3 263 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 COA3Q9Y2R0 106 aaPredicted RBP11.34□□□□□ -0.59
SSB-204ENST00000417292 SAMHD1Q9Y3Z3 626 aaKnown RBP11.34□□□□□ -0.59
SSB-204ENST00000417292 BIRC6Q9NR09 4857 aa11.34□□□□□ -0.59
SSB-204ENST00000417292 DHRS12A0PJE2 317 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 LRRC30A6NM36 301 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 DCTN6O00399 190 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 GSC2O15499 205 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 LIPFP07098 398 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 RAP2AP10114 183 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 RAC2P15153 192 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 SLC6A6P31641 620 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 GUCA1AP43080 201 aaPredicted RBP11.33□□□□□ -0.6
SSB-204ENST00000417292 HTR5AP47898 357 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 CENPAP49450 140 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 RPS6KA3P51812 740 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 TSPAN31Q12999 210 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 FLOT2Q14254 428 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 HERPUD1Q15011 391 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 METTL11BQ5VVY1 283 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 GPR139Q6DWJ6 353 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 SLC35E4Q6ICL7 350 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 ZNF770Q6IQ21 691 aaPredicted RBP11.33□□□□□ -0.6
SSB-204ENST00000417292 Q6ZTK2 550 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 TMEM179BQ7Z7N9 219 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 SYT9Q86SS6 491 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 C1orf87Q8N0U7 546 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 C11orf44Q8N8P7 122 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 SCCPDHQ8NBX0 429 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 OR8G5Q8NG78 346 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 OR13G1Q8NGZ3 307 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 FNDC8Q8TC99 324 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 LRTOMTQ8WZ04 291 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 SGCDQ92629 289 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 ITPKCQ96DU7 683 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 NMNAT3Q96T66 252 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 RASSF4Q9H2L5 321 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 FN3KQ9H479 309 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 TOR3AQ9H497 397 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 REEP1Q9H902 201 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 SMURF1Q9HCE7 757 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 SRA1Q9HD15 236 aaKnown RBP11.33□□□□□ -0.6
SSB-204ENST00000417292 POLE4Q9NR33 117 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 VPREB3Q9UKI3 123 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 POMPQ9Y244 141 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 SIGLEC9Q9Y336 463 aa11.33□□□□□ -0.6
SSB-204ENST00000417292 AQP12BA6NM10 295 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 C12orf71A8MTZ7 269 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 DOK2O60496 412 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 FCN3O75636 299 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 SOX14O95416 240 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 TXNDC12O95881 172 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 CST1P01037 141 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 HIST1H1CP16403 213 aaKnown RBP11.32□□□□□ -0.6
SSB-204ENST00000417292 MSR1P21757 451 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 NPY4RP50391 375 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 ARF6P62330 175 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 MEP1BQ16820 701 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 MICAQ29983 383 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 CD276Q5ZPR3 534 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 FBXW12Q6X9E4 464 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 VASH1Q7L8A9 365 aaPredicted RBP11.32□□□□□ -0.6
SSB-204ENST00000417292 AQP12AQ8IXF9 295 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 SDR9C7Q8NEX9 313 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 OR8D4Q8NGM9 314 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 PTTG3PQ9NZH4 202 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 VSX1Q9NZR4 365 aaPredicted RBP11.32□□□□□ -0.6
SSB-204ENST00000417292 FBLN5Q9UBX5 448 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 FOXJ3Q9UPW0 622 aa11.32□□□□□ -0.6
SSB-204ENST00000417292 KHDRBS3O75525 346 aaKnown RBP11.31□□□□□ -0.6
SSB-204ENST00000417292 HLA-DPB1P04440 258 aa11.31□□□□□ -0.6
SSB-204ENST00000417292 NOS3P29474 1203 aa11.31□□□□□ -0.6
SSB-204ENST00000417292 TGFBR2P37173 567 aa11.31□□□□□ -0.6
SSB-204ENST00000417292 GATA4P43694 442 aa11.31□□□□□ -0.6
SSB-204ENST00000417292 MAB21L1Q13394 359 aa11.31□□□□□ -0.6
SSB-204ENST00000417292 ADCK1Q86TW2 530 aa11.31□□□□□ -0.6
SSB-204ENST00000417292 HS3ST5Q8IZT8 346 aa11.31□□□□□ -0.6
SSB-204ENST00000417292 OR6V1Q8N148 313 aa11.31□□□□□ -0.6
SSB-204ENST00000417292 PNLDC1Q8NA58 520 aaKnown RBP11.31□□□□□ -0.6
SSB-204ENST00000417292 CYB561A3Q8NBI2 242 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms