RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 IGHV3-64DA0A0J9YX35 117 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 SNTNA6NMZ2 147 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 M0R129 80 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 GLCEO94923 617 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 GNAO1P09471 354 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 CLUP10909 449 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 ZNF12P17014 697 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 SLC2A5P22732 501 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 GCH1P30793 250 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 CD80P33681 288 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 MRPS34P82930 218 aaKnown RBP10.83□□□□□ -0.68
LINC00339-202ENST00000416769 CDK5R2Q13319 367 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 KCNMB1Q16558 191 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 ZNF718Q3SXZ3 478 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 NRN1LQ496H8 165 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 KLHL12Q53G59 568 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 MBNL2Q5VZF2 373 aaKnown RBP10.83□□□□□ -0.68
LINC00339-202ENST00000416769 GLB1L2Q8IW92 636 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 OR9Q1Q8NGQ5 310 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 ST7LQ8TDW4 575 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 ZNRF4Q8WWF5 429 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 RFKQ969G6 155 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 OTULINQ96BN8 352 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 ZNF582Q96NG8 517 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-202ENST00000416769 SIGLEC11Q96RL6 698 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 OR2H1Q9GZK4 316 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 C1orf198Q9H425 327 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 RERGLQ9H628 205 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 CCNB1IP1Q9NPC3 277 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 PLEK2Q9NYT0 353 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 INSIG2Q9Y5U4 225 aa10.83□□□□□ -0.68
LINC00339-202ENST00000416769 PLSCR5A0PG75 271 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 SLC22A31A6NKX4 558 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 ENTPD6O75354 484 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 WBP4O75554 376 aaKnown RBP10.82□□□□□ -0.68
LINC00339-202ENST00000416769 FOXH1O75593 365 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 GYPBP06028 91 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 RNASE1P07998 156 aaKnown RBP10.82□□□□□ -0.68
LINC00339-202ENST00000416769 GATA3P23771 443 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 FMO3P31513 532 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 PYCR1P32322 319 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 SLC6A9P48067 706 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 GDI2P50395 445 aaKnown RBP10.82□□□□□ -0.68
LINC00339-202ENST00000416769 TNFAIP6P98066 277 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-202ENST00000416769 HOXA4Q00056 320 aaPredicted RBP10.82□□□□□ -0.68
LINC00339-202ENST00000416769 PSG7Q13046 419 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 APOFQ13790 326 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 LINC01590Q5TEZ4 76 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 FAM27BQ5VT28 67 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 RBMS3Q6XE24 437 aaKnown RBP10.82□□□□□ -0.68
LINC00339-202ENST00000416769 BCDIN3DQ7Z5W3 292 aaKnown RBP10.82□□□□□ -0.68
LINC00339-202ENST00000416769 PROKR2Q8NFJ6 384 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 BBS1Q8NFJ9 593 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 APH1BQ8WW43 257 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 MARCH7Q9H992 704 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 SIAEQ9HAT2 523 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 PATZ1Q9HBE1 687 aaKnown RBP10.82□□□□□ -0.68
LINC00339-202ENST00000416769 TNFRSF19Q9NS68 423 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 TMEM106BQ9NUM4 274 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 HAO2Q9NYQ3 351 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 AASSQ9UDR5 926 aa10.82□□□□□ -0.68
LINC00339-202ENST00000416769 WARS2Q9UGM6 360 aaKnown RBP10.82□□□□□ -0.68
LINC00339-202ENST00000416769 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.82□□□□□ -0.68
LINC00339-202ENST00000416769 A0A1W2PPL8 197 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 CCDC182A6NF36 153 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 F5H0A9 414 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-202ENST00000416769 TIMM8AO60220 97 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-202ENST00000416769 PTHP01270 115 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 MT-ND5P03915 603 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 CD55P08174 381 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 ADH4P08319 380 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 HTR1FP30939 366 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 CXCR4P61073 352 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 LSM6P62312 80 aaKnown RBP10.81□□□□□ -0.68
LINC00339-202ENST00000416769 CSNK2BP67870 215 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 ENDOGQ14249 297 aaKnown RBP10.81□□□□□ -0.68
LINC00339-202ENST00000416769 LCN1P1Q5VSP4 162 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 DPPA2Q7Z7J5 298 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 OR2Z1Q8NG97 314 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 OR51L1Q8NGJ5 315 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 ITLN1Q8WWA0 313 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 SLC7A6Q92536 515 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 WACQ9BTA9 647 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 EMC7Q9NPA0 242 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 POLE4Q9NR33 117 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 DNAJC27Q9NZQ0 273 aa10.81□□□□□ -0.68
LINC00339-202ENST00000416769 RPL36Q9Y3U8 105 aaKnown RBP10.81□□□□□ -0.68
LINC00339-202ENST00000416769 PPIAL4EA0A075B759 164 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 TRAV40A0A0B4J280 105 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 PPIAL4CA0A0B4J2A2 164 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 CEACAM18A8MTB9 384 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 PPIAL4DF5H284 164 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 HLA-DQA2P01906 255 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 PPIAL4FP0DN26 164 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 ZNF823P16415 610 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 SELEP16581 610 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 GSTT1P30711 240 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 PRSS12P56730 875 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 KRTAP10-3P60369 221 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 RPS7P62081 194 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms