RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 METTL11BQ5VVY1 283 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 C17orf107Q6ZR85 190 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 DCXRQ7Z4W1 244 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 ZDHHC21Q8IVQ6 265 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 LNX2Q8N448 690 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 TMEM86BQ8N661 226 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 PNLDC1Q8NA58 520 aaKnown RBP11.97□□□□□ -0.49
PAF1-202ENST00000416728 OR51L1Q8NGJ5 315 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 WFDC12Q8WWY7 111 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 GATAD2BQ8WXI9 593 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 FAM71F1Q96KD3 344 aaPredicted RBP11.97□□□□□ -0.49
PAF1-202ENST00000416728 WDFY2Q96P53 400 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 TBX15Q96SF7 602 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 CHIAQ9BZP6 476 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 OPA3Q9H6K4 179 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 SMURF1Q9HCE7 757 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 COMMD3-BMI1R4GMX3 469 aa11.97□□□□□ -0.49
PAF1-202ENST00000416728 CENPVL3A0A0U1RRI6 287 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 hCG_1807616A0A1W2PRN6 198 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 C5orf63A6NC05 138 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 BHLHE40O14503 412 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 MELTFP08582 738 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 SPARCP09486 303 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 ANOS1P23352 680 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 PRKXP51817 358 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 DEFA6Q01524 100 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 TAF13Q15543 124 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 LYPD4Q6UWN0 246 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 ZNF826PQ6ZT77 177 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 PGAM4Q8N0Y7 254 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 KIR3DL3Q8N743 410 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 OR9Q2Q8NGE9 314 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 OR56B2PQ8NGI1 322 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 OR9Q1Q8NGQ5 310 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 SSMEM1Q8WWF3 244 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 DDOQ99489 341 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 TRIM15Q9C019 465 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 FAM107BQ9H098 131 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 CENPMQ9NSP4 180 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 C14orf119Q9NWQ9 140 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 C1RLQ9NZP8 487 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 N6AMT1Q9Y5N5 214 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 POMT1Q9Y6A1 747 aa11.96□□□□□ -0.49
PAF1-202ENST00000416728 XRCC2O43543 280 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 KRT36O76013 467 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 NDUFA7O95182 113 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 GYPAP02724 150 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 SLC2A1P11166 492 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 PSKH1P11801 424 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 ENTPD1P49961 510 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 PDCD1Q15116 288 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 PDLIM3Q53GG5 364 aaPredicted RBP11.95□□□□□ -0.5
PAF1-202ENST00000416728 FAM90A1Q86YD7 464 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 LINC00471Q8N535 108 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 GCSAMQ8N6F7 178 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 SLC37A3Q8NCC5 494 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 OR8S1Q8NH09 359 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 ZNRF4Q8WWF5 429 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 SLAMF6Q96DU3 332 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 CDRT15Q96T59 188 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 KCNJ15Q99712 375 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 BTBD10Q9BSF8 475 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 RASSF4Q9H2L5 321 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 ACOXLQ9NUZ1 547 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 IL20Q9NYY1 176 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 CD300AQ9UGN4 299 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 LYVE1Q9Y5Y7 322 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 TRRAPQ9Y4A5 3859 aa11.95□□□□□ -0.5
PAF1-202ENST00000416728 IGHV1-69DA0A0B4J2H0 117 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 ANKRD30BLA7E2S9 258 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 ZNF878C9JN71 531 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 TNFRSF11BO00300 401 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 ECDO95905 644 aaPredicted RBP11.94□□□□□ -0.5
PAF1-202ENST00000416728 IGHV1-69P01742 117 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 FMO3P31513 532 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 DDOSTP39656 456 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 HMGA2P52926 109 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 RPL15P61313 204 aaKnown RBP11.94□□□□□ -0.5
PAF1-202ENST00000416728 RELBQ01201 579 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 SRSF4Q08170 494 aaKnown RBP11.94□□□□□ -0.5
PAF1-202ENST00000416728 C11orf91Q3C1V1 193 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 MIDNQ504T8 468 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 OLFML2AQ68BL7 652 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 BRICD5Q6PL45 260 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 BTN2A1Q7KYR7 527 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 OR8D4Q8NGM9 314 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 TBC1D15Q8TC07 691 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 LHX4Q969G2 390 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 SIRPDQ9H106 197 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 TBC1D23Q9NUY8 699 aa11.94□□□□□ -0.5
PAF1-202ENST00000416728 CLPSL1A2RUU4 121 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 ZNF593O00488 134 aaPredicted RBP11.93□□□□□ -0.5
PAF1-202ENST00000416728 DVL1O14640 695 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 TBX1O43435 398 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 SNX3O60493 162 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 GYPBP06028 91 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 GRK5P34947 590 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 SLC15A1P46059 708 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 ARF6P62330 175 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 POU4F2Q12837 409 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms