RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ZNF826PQ6ZT77 177 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 SLC36A1Q7Z2H8 476 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 NAA40Q86UY6 237 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 LNX2Q8N448 690 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 GCSAMQ8N6F7 178 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 SLC26A10Q8NG04 563 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 SLC7A13Q8TCU3 470 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 MRAPQ8TCY5 172 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 PPP1R14AQ96A00 147 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 HSH2DQ96JZ2 352 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 ERMAPQ96PL5 475 aaPredicted RBP8.25□□□□□ -1.09
MDC1-202ENST00000416571 MRPL15Q9P015 296 aaKnown RBP8.25□□□□□ -1.09
MDC1-202ENST00000416571 KAAG1Q9UBP8 84 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 FBLN5Q9UBX5 448 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 B9D1Q9UPM9 204 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 AP3M1Q9Y2T2 418 aa8.25□□□□□ -1.09
MDC1-202ENST00000416571 FAM32AQ9Y421 112 aaKnown RBP8.25□□□□□ -1.09
MDC1-202ENST00000416571 PLXNB1O43157 2135 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 IGLV1-36A0A0B4J1U3 117 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 LOC100653049A0A140TA62 436 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 A0A1W2PRD5 423 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 A0A1W2PRF3 423 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 A0A1W2PRM7 423 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 MEIOCA2RUB1 952 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 UNC119BA6NIH7 251 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 CXCR6O00574 342 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 NPFFO15130 113 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 GPR37O15354 613 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 NDUFB3O43676 98 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 EDF1O60869 148 aaKnown RBP8.24□□□□□ -1.09
MDC1-202ENST00000416571 PTP4A3O75365 173 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 KRT34O76011 436 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 TXNDC12O95881 172 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 H1F0P07305 194 aaKnown RBP8.24□□□□□ -1.09
MDC1-202ENST00000416571 ZNF823P16415 610 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 NOS3P29474 1203 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 ZNF92Q03936 586 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 RFX4Q33E94 735 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 KRTAP27-1Q3LI81 207 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 KPRPQ5T749 579 aaPredicted RBP8.24□□□□□ -1.09
MDC1-202ENST00000416571 SAMD5Q5TGI4 173 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 TEX36Q5VZQ5 186 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 C11orf88Q6PI97 169 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 SMARCD3Q6STE5 483 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 METAP1DQ6UB28 335 aaPredicted RBP8.24□□□□□ -1.09
MDC1-202ENST00000416571 CBLL1Q75N03 491 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 ARPINQ7Z6K5 226 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 OR6V1Q8N148 313 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 C11orf44Q8N8P7 122 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 OR8S1Q8NH09 359 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 OR2AE1Q8NHA4 323 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 NMNAT3Q96T66 252 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 CCL13Q99616 98 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 RPRD1BQ9NQG5 326 aaKnown RBP8.24□□□□□ -1.09
MDC1-202ENST00000416571 DNAJB11Q9UBS4 358 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 ENPP4Q9Y6X5 453 aa8.24□□□□□ -1.09
MDC1-202ENST00000416571 ANKRD30BLA7E2S9 258 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 RNASEK-C17orf49H0YIS7 233 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 SERPINA1P01009 418 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 MUC1P15941 1255 aaPredicted RBP8.23□□□□□ -1.09
MDC1-202ENST00000416571 SLC6A6P31641 620 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 SAA4P35542 130 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 OMPP47874 163 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 LOXL3P58215 753 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 PRB3Q04118 309 aaPredicted RBP8.23□□□□□ -1.09
MDC1-202ENST00000416571 KLF10Q13118 480 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 IKZF1Q13422 519 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 PCK2Q16822 640 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 SNAI3Q3KNW1 292 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 LRRC10Q5BKY1 277 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 WDR38Q5JTN6 314 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 GLYATL3Q5SZD4 288 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 OR56B2PQ8NGI1 322 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 OR4C15Q8NGM1 316 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 OR4C13Q8NGP0 309 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 OR4K13Q8NH42 304 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 OR2T6Q8NHC8 308 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 FANK1Q8TC84 345 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 LRRC29Q8WV35 223 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 H1FXQ92522 213 aaKnown RBP8.23□□□□□ -1.09
MDC1-202ENST00000416571 SGCDQ92629 289 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 FAM162AQ96A26 154 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 CLPTM1LQ96KA5 538 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 DMRTB1Q96MA1 342 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 FAM234AQ9H0X4 552 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 OPA3Q9H6K4 179 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.23□□□□□ -1.09
MDC1-202ENST00000416571 CYB5R1Q9UHQ9 305 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 KCNG2Q9UJ96 466 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 N6AMT1Q9Y5N5 214 aa8.23□□□□□ -1.09
MDC1-202ENST00000416571 A0A1W2PRQ8 180 aa8.22□□□□□ -1.09
MDC1-202ENST00000416571 H3BUX3 64 aa8.22□□□□□ -1.09
MDC1-202ENST00000416571 XPNPEP2O43895 674 aa8.22□□□□□ -1.09
MDC1-202ENST00000416571 FCN3O75636 299 aa8.22□□□□□ -1.09
MDC1-202ENST00000416571 LHBP01229 141 aa8.22□□□□□ -1.09
MDC1-202ENST00000416571 HIST1H1CP16403 213 aaKnown RBP8.22□□□□□ -1.09
MDC1-202ENST00000416571 NAA10P41227 235 aaPredicted RBP8.22□□□□□ -1.09
MDC1-202ENST00000416571 SLC7A2P52569 658 aa8.22□□□□□ -1.09
MDC1-202ENST00000416571 FXYD6P3P58550 94 aa8.22□□□□□ -1.09
MDC1-202ENST00000416571 LIPEQ05469 1076 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms