RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 POU4F2Q12837 409 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 ALKBH6Q3KRA9 238 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 TIMM50Q3ZCQ8 353 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 ZMAT1Q5H9K5 638 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 IL17RELQ6ZVW7 336 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 SYT9Q86SS6 491 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 ZNF485Q8NCK3 441 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 OR52N1Q8NH53 320 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 NABP1Q96AH0 204 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 TIMD4Q96H15 378 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 Q96M85 177 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 NMNAT2Q9BZQ4 307 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 INPP5EQ9NRR6 644 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 ERVK13-1Q9NX77 482 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 GRIP1Q9Y3R0 1128 aa17.47■□□□□ 0.39
PTPRU-203ENST00000415600 TEX13CA0A0J9YWL9 993 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 CLUP10909 449 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 LAP3P28838 519 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 NCS1P62166 190 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 LSM3P62310 102 aaKnown RBP17.46■□□□□ 0.39
PTPRU-203ENST00000415600 CCL8P80075 99 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 SLC35D3Q5M8T2 416 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 OR2G6Q5TZ20 316 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 LCN1P1Q5VSP4 162 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 GPR139Q6DWJ6 353 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 KLHL36Q8N4N3 616 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 ACBD7Q8N6N7 88 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 OR51F2Q8NH61 342 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 RASD2Q96D21 266 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 POM121L2Q96KW2 1035 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 SOX7Q9BT81 388 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 OR2H1Q9GZK4 316 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 EGLN1Q9GZT9 426 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 SAP30LQ9HAJ7 183 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 ADGRL4Q9HBW9 690 aa17.46■□□□□ 0.39
PTPRU-203ENST00000415600 SBK2P0C263 348 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 CPEP16870 476 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 ZNF81P51508 661 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 PSG4Q00888 419 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 HFEQ30201 348 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 LHFPL3Q86UP9 236 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 RFLNBQ8N5W9 214 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 OR9Q1Q8NGQ5 310 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 CLDND2Q8NHS1 167 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 NDNFQ8TB73 568 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 ELMOD3Q96FG2 381 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 TSPAN32Q96QS1 320 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 NMNAT3Q96T66 252 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 OR51E2Q9H255 320 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 NARFLQ9H6Q4 476 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 NDUFB11Q9NX14 153 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 IGHV1-69-2A0A0G2JMI3 117 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 NCR1O76036 304 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 GYPBP06028 91 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 TUBG1P23258 451 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 CRYBB2P43320 205 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 MAGEB1P43366 347 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 SLC25A1P53007 311 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 ERVS71-1P61550 626 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 SLC3A1Q07837 685 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 ACSM1Q08AH1 577 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 SCRN3Q0VDG4 424 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 JAZF1Q86VZ6 243 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 AKR7LQ8NHP1 331 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 RAB39BQ96DA2 213 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 DIRC2Q96SL1 478 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 TUBG2Q9NRH3 451 aa17.45■□□□□ 0.38
PTPRU-203ENST00000415600 CAB39Q9Y376 341 aaPredicted RBP17.45■□□□□ 0.38
PTPRU-203ENST00000415600 OR6C68A6NDL8 312 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 CLDN25C9JDP6 229 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 CDC14BO60729 498 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 MSMBP08118 114 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 CDKN2AP42771 156 aaKnown RBP17.44■□□□□ 0.38
PTPRU-203ENST00000415600 ACTC1P68032 377 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 ACTA1P68133 377 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 KRR1Q13601 381 aaKnown RBP17.44■□□□□ 0.38
PTPRU-203ENST00000415600 TPBGQ13641 420 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 MBNL2Q5VZF2 373 aaKnown RBP17.44■□□□□ 0.38
PTPRU-203ENST00000415600 LEG1Q6P5S2 330 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 FOXL2NBQ6ZUU3 175 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 ABHD4Q8TB40 342 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 DYNC2LI1Q8TCX1 351 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 GATAD2BQ8WXI9 593 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 RAB1CQ92928 201 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 YIPF5Q969M3 257 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 TMEM186Q96B77 213 aa17.44■□□□□ 0.38
PTPRU-203ENST00000415600 CUBNO60494 3623 aa17.43■□□□□ 0.38
PTPRU-203ENST00000415600 SVEP1Q4LDE5 3571 aa17.43■□□□□ 0.38
PTPRU-203ENST00000415600 IGKV1D-43A0A0B4J1Z2 117 aa17.43■□□□□ 0.38
PTPRU-203ENST00000415600 TCF21O43680 179 aa17.43■□□□□ 0.38
PTPRU-203ENST00000415600 RP2O75695 350 aa17.43■□□□□ 0.38
PTPRU-203ENST00000415600 SPI1P17947 270 aa17.43■□□□□ 0.38
PTPRU-203ENST00000415600 PPP1CBP62140 327 aa17.43■□□□□ 0.38
PTPRU-203ENST00000415600 GLO1Q04760 184 aa17.43■□□□□ 0.38
PTPRU-203ENST00000415600 GALEQ14376 348 aa17.43■□□□□ 0.38
PTPRU-203ENST00000415600 MESTQ5EB52 335 aa17.43■□□□□ 0.38
PTPRU-203ENST00000415600 GDPGP1Q6ZNW5 385 aa17.43■□□□□ 0.38
PTPRU-203ENST00000415600 USP43Q70EL4 1123 aa17.43■□□□□ 0.38
PTPRU-203ENST00000415600 HIF1ANQ9NWT6 349 aa17.43■□□□□ 0.38
PTPRU-203ENST00000415600 TRAV20A0A0B4J274 112 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms