RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 UBAC2Q8NBM4 344 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF439Q8NDP4 499 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 OR4M1Q8NGD0 313 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 OR52B6Q8NGF0 335 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 OR13J1Q8NGT2 312 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 OR6K6Q8NGW6 343 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 OR2AJ1Q8NGZ0 328 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 OR4L1Q8NH43 312 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 OR5B3Q8NH48 314 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 OR13C6PQ8NH95 151 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 RPLP0P6Q8NHW5 317 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 SPPL2BQ8TCT7 592 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 TFB1MQ8WVM0 346 aaKnown RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 CANT1Q8WVQ1 401 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 LCN9Q8WX39 176 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM37Q8WXS4 190 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 MRPS31Q92665 395 aaKnown RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 APOBEC3DQ96AK3 386 aaPredicted RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 RNF183Q96D59 192 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 PIK3IP1Q96FE7 263 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 SDSLQ96GA7 329 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 GRAMD2BQ96HH9 432 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 ST6GAL2Q96JF0 529 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 WDR92Q96MX6 357 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 OR6C1Q96RD1 312 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 FCRL5Q96RD9 977 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 GINS3Q9BRX5 216 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 MARVELD1Q9BSK0 173 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 C16orf70Q9BSU1 422 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 RNF26Q9BY78 433 aaPredicted RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 DPAGT1Q9H3H5 408 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 PPDPFQ9H3Y8 114 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 CST9LQ9H4G1 147 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF385DQ9H6B1 395 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 MAGIXQ9H6Y5 334 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 EFCAB1Q9HAE3 211 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 POLD4Q9HCU8 107 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 SLC25A37Q9NYZ2 338 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 PRO0628Q9UI54 55 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 UBQLN1Q9UMX0 589 aaKnown RBP3.15□□□□□ -1.91
SF3B1-203ENST00000414174 TMED7Q9Y3B3 224 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 A3GALT2U3KPV4 340 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 NAIPQ13075 1403 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 CHD1O14646 1710 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 NAV1Q8NEY1 1877 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM131LA2VDJ0 1609 aa3.15□□□□□ -1.91
SF3B1-203ENST00000414174 TOP2AP11388 1531 aaKnown RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 METP08581 1390 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TNS3Q68CZ2 1445 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 A0A087WUJ7 227 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TRAV39A0A0B4J263 110 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TRAV24A0A0B4J272 114 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 IGHV2-70DA0A0C4DH43 119 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 KIR2DS5A0A0G2JLQ3 304 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 A0A0G2JNG1 304 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 A0A1W2PRE2 83 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM200CA6NKL6 621 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 C1orf196B1AJZ1 125 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 C17orf105B2RV13 164 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TCP10L2B9ZVM9 353 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 NPIPB9F8W1W9 429 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 GFYI3L273 518 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 AP4M1O00189 453 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 UPK1AO00322 258 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 FOXN1O15353 648 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 PHF1O43189 567 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 XRCC3O43542 346 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 SYT7O43581 403 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 GALR3O60755 368 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 RDH16O75452 317 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TRAPPC6AO75865 159 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 STK17BO94768 372 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 ATG12O94817 140 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 DIRAS1O95057 198 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 IGF1P05019 195 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 EDN1P05305 212 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 HPNP05981 417 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 OR5H8P0DN80 308 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 PSG1P11464 419 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 IRF2P14316 349 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 GATA1P15976 413 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 HOXB9P17482 250 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 AOC1P19801 751 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 PGCP20142 388 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 PVALBP20472 110 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 CERS1P27544 350 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 APLNRP35414 380 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 MDH2P40926 338 aaKnown RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 LEPP41159 167 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 MNDAP41218 407 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 GSK3BP49841 420 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF134P52741 427 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 CTSCP53634 463 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 GAS1P54826 345 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TAS2R31P59538 309 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 TPI1P60174 286 aa3.14□□□□□ -1.91
SF3B1-203ENST00000414174 ABCE1P61221 599 aaKnown RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 RPL8P62917 257 aaKnown RBP3.14□□□□□ -1.91
SF3B1-203ENST00000414174 DCDP81605 110 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms