RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TMEM19Q96HH6 336 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 ZFP3Q96NJ6 502 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 PRRT1Q99946 306 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 PDCD10Q9BUL8 212 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 ARL6Q9H0F7 186 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 ZCCHC4Q9H5U6 513 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 PLEKHA1Q9HB21 404 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 RAB9BQ9NP90 201 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 TRIM36Q9NQ86 728 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 TAS2R5Q9NYW4 299 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 B9D1Q9UPM9 204 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 ATG4BQ9Y4P1 393 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 COLEC10Q9Y6Z7 277 aa8.36□□□□□ -1.07
SNHG3-201ENST00000413987 A0A0G2JN53 185 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 SEMA7AO75326 666 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 C1GALT1C1LP0DN25 315 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 GDNFP39905 211 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 OMPP47874 163 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 DLX5P56178 289 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 TAS2R43P59537 309 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 RPS13P62277 151 aaKnown RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 PPIAP62937 165 aaKnown RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 INSL4Q14641 139 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 TAF13Q15543 124 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF791Q3KP31 576 aaPredicted RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 ABHD17BQ5VST6 288 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 FAM71E1Q6IPT2 247 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 MED27Q6P2C8 311 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 NIPAL3Q6P499 406 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 KCNIP4Q6PIL6 250 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 C17orf64Q86WR6 236 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 STHQ8IWL8 128 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 OR4F15Q8NGB8 312 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 OR11G2Q8NGC1 345 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 OR6K3Q8NGY3 331 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 OR2L8Q8NGY9 312 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 C16orf78Q8WTQ4 265 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 PNPLA2Q96AD5 504 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF649Q9BS31 505 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 BEX1Q9HBH7 125 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 MRPS18BQ9Y676 258 aaKnown RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 PCDH15Q96QU1 1955 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 EP300Q09472 2414 aaPredicted RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 A6NIN4 97 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 RS1O15537 224 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF749O43361 778 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 TBX6O95947 436 aaPredicted RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 UBBP0CG47 229 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 UBCP0CG48 685 aaKnown RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 RAB3BP20337 219 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 VEGFCP49767 419 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 ERVS71-1P61550 626 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 RPS27AP62979 156 aaKnown RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 UBA52P62987 128 aaKnown RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 HSPB3Q12988 150 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 ELOCQ15369 112 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 ZNHIT3Q15649 155 aaPredicted RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 SERTAD4-AS1Q5TG53 156 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF626Q68DY1 528 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 HAGHLQ6PII5 290 aaPredicted RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 MOB3CQ70IA8 216 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 DPPA2Q7Z7J5 298 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF100Q8IYN0 542 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 MORN4Q8NDC4 146 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 STXBP6Q8NFX7 210 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 OR51Q1Q8NH59 317 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 ACOT11Q8WXI4 607 aaPredicted RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 MOAP1Q96BY2 351 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 HARBI1Q96MB7 349 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 UTP23Q9BRU9 249 aaKnown RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 RBM24Q9BX46 236 aaKnown RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 SLITRK2Q9H156 845 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 ESRP2Q9H6T0 727 aaKnown RBP8.35□□□□□ -1.07
SNHG3-201ENST00000413987 WDR54Q9H977 334 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 ELOVL3Q9HB03 270 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 HRASLSQ9HDD0 168 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 RNF150Q9ULK6 438 aa8.35□□□□□ -1.07
SNHG3-201ENST00000413987 RP1P56715 2156 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 A0A0G2JK05 382 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 UBE2QL1A1L167 161 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 PRR33A8MZF0 331 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 RNASEK-C17orf49H0YIS7 233 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 ARPC5O15511 151 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 HCRTR1O43613 425 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 OR1F1O43749 312 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF205O95201 554 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 ITGB2P05107 769 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 PVALBP20472 110 aaPredicted RBP8.34□□□□□ -1.07
SNHG3-201ENST00000413987 RFC3P40938 356 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 ERVK-25P63136 954 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 SIRPAP78324 504 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 PRDX1Q06830 199 aaKnown RBP8.34□□□□□ -1.07
SNHG3-201ENST00000413987 HLA-BQ31612 363 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF660Q6AZW8 331 aaPredicted RBP8.34□□□□□ -1.07
SNHG3-201ENST00000413987 LCTLQ6UWM7 567 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 SLC16A9Q7RTY1 509 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 SVBPQ8N300 66 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 ACBD7Q8N6N7 88 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 FLVCR1-AS1Q8TAF5 88 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 ASB5Q8WWX0 329 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms