RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 HBMQ6B0K9 141 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 THOC7Q6I9Y2 204 aaKnown RBP3.7□□□□□ -1.82
LSM5-205ENST00000409952 TEX43Q6ZNM6 134 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 HSD17B13Q7Z5P4 300 aaPredicted RBP3.7□□□□□ -1.82
LSM5-205ENST00000409952 PGAM4Q8N0Y7 254 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 TMEM251Q8N6I4 163 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 OR4K2Q8NGD2 314 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 RNF133Q8WVZ7 376 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 IL22RA2Q969J5 263 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 DUX3Q96PT4 197 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 NICN1Q9BSH3 213 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 YTHDF1Q9BYJ9 559 aaKnown RBP3.7□□□□□ -1.82
LSM5-205ENST00000409952 BARHL1Q9BZE3 327 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 NXF2Q9GZY0 626 aaKnown RBP3.7□□□□□ -1.82
LSM5-205ENST00000409952 COA1Q9GZY4 146 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 ARV1Q9H2C2 271 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 RGS18Q9NS28 235 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 CD274Q9NZQ7 290 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 ZNF581Q9P0T4 197 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 PROCRQ9UNN8 238 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 TFR2Q9UP52 801 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 ZNF257Q9Y2Q1 563 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 UBIAD1Q9Y5Z9 338 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 KIAA0232Q92628 1395 aa3.7□□□□□ -1.82
LSM5-205ENST00000409952 CEMIPQ8WUJ3 1361 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 KIR2DS1A0A191URI9 304 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 C9J4A7 227 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 H3BNH8 94 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 J3QLI3 93 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 ATP8B1O43520 1251 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 MPZL2O60487 215 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 UPK1BO75841 260 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 MPZL1O95297 269 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 RAB3DO95716 219 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 LIMS3P0CW19 117 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 LIMS4P0CW20 117 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 IGHV3-43DP0DP04 118 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 ICAM2P13598 275 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 RAB3BP20337 219 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 WARSP23381 471 aaKnown RBP3.69□□□□□ -1.82
LSM5-205ENST00000409952 MYL9P24844 172 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 EVI2BP34910 448 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 RPA3P35244 121 aaPredicted RBP3.69□□□□□ -1.82
LSM5-205ENST00000409952 MYCNOSP40205 109 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 TUFMP49411 452 aaKnown RBP3.69□□□□□ -1.82
LSM5-205ENST00000409952 VSX2P58304 361 aaPredicted RBP3.69□□□□□ -1.82
LSM5-205ENST00000409952 TAS2R31P59538 309 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 IRX1P78414 480 aaPredicted RBP3.69□□□□□ -1.82
LSM5-205ENST00000409952 STX5Q13190 355 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 KIR2DS1Q14954 304 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 TRIP13Q15645 432 aaPredicted RBP3.69□□□□□ -1.82
LSM5-205ENST00000409952 COX19Q49B96 90 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 TMEM31Q5JXX7 168 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 DRAM2Q6UX65 266 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 RFLNAQ6ZTI6 216 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 SLC25A42Q86VD7 318 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 LRRC34Q8IZ02 419 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 TMEM61Q8N0U2 210 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 SPICQ8N5J4 248 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 OR10AD1Q8NGE0 317 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 YIPF6Q96EC8 236 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 SEH1LQ96EE3 360 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 ASB8Q9H765 288 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 RDH14Q9HBH5 336 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 CCL28Q9NRJ3 127 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 MARCH5Q9NX47 278 aa3.69□□□□□ -1.82
LSM5-205ENST00000409952 TBL2Q9Y4P3 447 aaKnown RBP3.69□□□□□ -1.82
LSM5-205ENST00000409952 MRPS18BQ9Y676 258 aaKnown RBP3.69□□□□□ -1.82
LSM5-205ENST00000409952 PHF3Q92576 2039 aaKnown RBP3.68□□□□□ -1.82
LSM5-205ENST00000409952 ISPDA4D126 451 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 FTCDNL1E5RQL4 147 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 GOLGA6L19H0YKK7 550 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 H7C417 338 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 TNFRSF11BO00300 401 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 SLC16A4O15374 487 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 FABP7O15540 132 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 FGF16O43320 207 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 EDIL3O43854 480 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 PTHP01270 115 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 IGHV3-23P01764 117 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 SLC35G6P0C7Q6 338 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 COX5BP10606 129 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 ZNF35P13682 527 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 HIST1H1CP16403 213 aaKnown RBP3.68□□□□□ -1.82
LSM5-205ENST00000409952 GDF1P27539 372 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 OR3A4PP47883 348 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 STC1P52823 247 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 CEBPGP53567 150 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 RHOAP61586 193 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 TCP10Q12799 353 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 CAPRIN1Q14444 709 aaKnown RBP3.68□□□□□ -1.82
LSM5-205ENST00000409952 SGCAQ16586 387 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 LRRC10Q5BKY1 277 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 CASC10Q5T4H9 136 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 LINC00173Q6ZV60 143 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 Q6ZVH6 145 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 H2AFVQ71UI9 128 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 C2orf73Q8N5S3 287 aaPredicted RBP3.68□□□□□ -1.82
LSM5-205ENST00000409952 METTL13Q8N6R0 699 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 OR4K17Q8NGC6 315 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms