RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 GABRA1P14867 456 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 ZNF24P17028 368 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 PRSS3P35030 304 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 SLC6A9P48067 706 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 NOVA1P51513 510 aaKnown RBP5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 RAB25P57735 213 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 KLF9Q13886 244 aaPredicted RBP5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 TATDN3Q17R31 274 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 CEACAM16Q2WEN9 425 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 ATP1A1-AS1Q5TC04 95 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 Q6ZSR3 168 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 SLC16A14Q7RTX9 510 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 VASH2Q86V25 355 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 OR1F12Q8NHA8 337 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 PP6455Q8WZ26 134 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 FAM71F1Q96KD3 344 aaPredicted RBP5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 DEFB127Q9H1M4 99 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 EXO5Q9H790 373 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 CNTD2Q9H8S5 307 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 BCO1Q9HAY6 547 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 NEK6Q9HC98 313 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 GP6Q9HCN6 339 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 ZNF319Q9P2F9 582 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 FBLN5Q9UBX5 448 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 KLK11Q9UBX7 282 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 CGGBP1Q9UFW8 167 aaPredicted RBP5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 ZNF391Q9UJN7 358 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 CPAMD8Q8IZJ3 1885 aa5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 RIF1Q5UIP0 2472 aaKnown RBP5.5□□□□□ -1.53
GTF3C3-202ENST00000409364 TRAV17A0A0B4J275 112 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 CIB4A0PJX0 185 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 OR6C6A6NF89 314 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 DHRS7CA6NNS2 312 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 H7C417 338 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 SYNGR3O43761 229 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 LMX1BO60663 402 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 DHRS3O75911 302 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 IGLV3-1P01715 115 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 CHRM2P08172 466 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 CSF1P09603 554 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 UBBP0CG47 229 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 ABOP16442 354 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 ZNF32P17041 273 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 CRYGSP22914 178 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 GIFP27352 417 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 THBS4P35443 961 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 FAUP35544 74 aaKnown RBP5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 ZNF93P35789 620 aaPredicted RBP5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 EFNB2P52799 333 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 PSG4Q00888 419 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 RNASE12Q5GAN4 147 aaKnown RBP5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 TSPO2Q5TGU0 170 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 UTS2BQ765I0 119 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 BTN2A1Q7KYR7 527 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 ZNF627Q7L945 461 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 ADGRE4PQ86SQ3 457 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 NAA40Q86UY6 237 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 ANGPTL5Q86XS5 388 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 TUSC5Q8IXB3 177 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 OR52N4Q8NGI2 321 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 OR4D6Q8NGJ1 314 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 OR13C9Q8NGT0 318 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 OR14K1Q8NGZ2 314 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 OR6F1Q8NGZ6 308 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 OR56B4Q8NH76 319 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 FNDC9Q8TBE3 224 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 UBASH3BQ8TF42 649 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 ITFG2Q969R8 447 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 APH1AQ96BI3 265 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 KRTAP4-5Q9BYR2 181 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 RGCCQ9H4X1 137 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 ZDHHC11Q9H8X9 412 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 SCPEP1Q9HB40 452 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 HRASLSQ9HDD0 168 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 UPB1Q9UBR1 384 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 GHRLQ9UBU3 117 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 MTFP1Q9UDX5 166 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 ATPIF1Q9UII2 106 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 ZNF221Q9UK13 617 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 ZNF175Q9Y473 711 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 V9GYS6 101 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 WDFY3Q8IZQ1 3526 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 PCSK5Q92824 1860 aa5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 ZFHX2Q9C0A1 2572 aaPredicted RBP5.49□□□□□ -1.53
GTF3C3-202ENST00000409364 ZNF587BE7ETH6 402 aa5.48□□□□□ -1.53
GTF3C3-202ENST00000409364 PROB1E7EW31 1015 aa5.48□□□□□ -1.53
GTF3C3-202ENST00000409364 DLL1O00548 723 aa5.48□□□□□ -1.53
GTF3C3-202ENST00000409364 SIAH2O43255 324 aa5.48□□□□□ -1.53
GTF3C3-202ENST00000409364 H2AFB2P0C5Z0 115 aa5.48□□□□□ -1.53
GTF3C3-202ENST00000409364 TMIGD3P0DMS9 266 aaPredicted RBP5.48□□□□□ -1.53
GTF3C3-202ENST00000409364 PRF1P14222 555 aa5.48□□□□□ -1.53
GTF3C3-202ENST00000409364 B4GALT1P15291 398 aa5.48□□□□□ -1.53
GTF3C3-202ENST00000409364 PSMB1P20618 241 aaKnown RBP5.48□□□□□ -1.53
GTF3C3-202ENST00000409364 BTCP35070 178 aa5.48□□□□□ -1.53
GTF3C3-202ENST00000409364 ACTBP60709 375 aa5.48□□□□□ -1.53
GTF3C3-202ENST00000409364 ACTG1P63261 375 aa5.48□□□□□ -1.53
GTF3C3-202ENST00000409364 ARF1P84077 181 aaKnown RBP5.48□□□□□ -1.53
GTF3C3-202ENST00000409364 CD300CQ08708 224 aa5.48□□□□□ -1.53
GTF3C3-202ENST00000409364 PLA2G7Q13093 441 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms