RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 STARD10Q9Y365 291 aa14.54□□□□□ -0.08
SSB-202ENST00000409333 TRBV5-7A0A0A0MS05 114 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 IGHV2OR16-5A0A0B4J2B6 119 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 ANKRD61A6NGH8 418 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 CLDN14O95500 239 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 EPXP11678 715 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 PAX7P23759 505 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 PCSK6P29122 969 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 C1QTNF12Q5T7M4 302 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 USP43Q70EL4 1123 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 DOK3Q7L591 496 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 PLPP7Q8NBV4 271 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 LRRC46Q96FV0 321 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 MED18Q9BUE0 208 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 ZNF275Q9NSD4 429 aaPredicted RBP14.53□□□□□ -0.08
SSB-202ENST00000409333 TBCCD1Q9NVR7 557 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 PLCE1Q9P212 2302 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 MYO18BQ8IUG5 2567 aa14.53□□□□□ -0.08
SSB-202ENST00000409333 XRCC2O43543 280 aa14.52□□□□□ -0.08
SSB-202ENST00000409333 ICMTO60725 284 aa14.52□□□□□ -0.08
SSB-202ENST00000409333 PPP3CBP16298 524 aa14.52□□□□□ -0.08
SSB-202ENST00000409333 AGAP20933 346 aa14.52□□□□□ -0.08
SSB-202ENST00000409333 MAPK3P27361 379 aaPredicted RBP14.52□□□□□ -0.08
SSB-202ENST00000409333 SDC2P34741 201 aa14.52□□□□□ -0.08
SSB-202ENST00000409333 NAAAQ02083 359 aa14.52□□□□□ -0.08
SSB-202ENST00000409333 MXD1Q05195 221 aa14.52□□□□□ -0.08
SSB-202ENST00000409333 HLXQ14774 488 aaPredicted RBP14.52□□□□□ -0.08
SSB-202ENST00000409333 C3orf36Q3SXR2 165 aa14.52□□□□□ -0.08
SSB-202ENST00000409333 HSD17B12Q53GQ0 312 aa14.52□□□□□ -0.08
SSB-202ENST00000409333 ASPHD2Q6ICH7 369 aa14.52□□□□□ -0.08
SSB-202ENST00000409333 XKRXQ6PP77 449 aa14.52□□□□□ -0.08
SSB-202ENST00000409333 PAMR1Q6UXH9 720 aa14.52□□□□□ -0.08
SSB-202ENST00000409333 ZNF808Q8N4W9 903 aaPredicted RBP14.52□□□□□ -0.08
SSB-202ENST00000409333 OR14K1Q8NGZ2 314 aa14.52□□□□□ -0.08
SSB-202ENST00000409333 PTTG3PQ9NZH4 202 aa14.52□□□□□ -0.08
SSB-202ENST00000409333 ANKHD1Q8IWZ3 2542 aaKnown RBP14.52□□□□□ -0.08
SSB-202ENST00000409333 SMIM30A4D0T7 59 aa14.52□□□□□ -0.09
SSB-202ENST00000409333 DHRS3O75911 302 aa14.52□□□□□ -0.09
SSB-202ENST00000409333 ARL6IP5O75915 188 aa14.52□□□□□ -0.09
SSB-202ENST00000409333 CDRT1O95170 752 aa14.52□□□□□ -0.09
SSB-202ENST00000409333 ZNF182P17025 639 aaPredicted RBP14.52□□□□□ -0.09
SSB-202ENST00000409333 ERVS71-1P61550 626 aa14.52□□□□□ -0.09
SSB-202ENST00000409333 SPOCK1Q08629 439 aa14.52□□□□□ -0.09
SSB-202ENST00000409333 TNK1Q13470 666 aa14.52□□□□□ -0.09
SSB-202ENST00000409333 GK2Q14410 553 aaPredicted RBP14.52□□□□□ -0.09
SSB-202ENST00000409333 SPATA46Q5T0L3 261 aa14.52□□□□□ -0.09
SSB-202ENST00000409333 KBTBD8Q8NFY9 601 aa14.52□□□□□ -0.09
SSB-202ENST00000409333 LINC01560Q8TB33 94 aa14.52□□□□□ -0.09
SSB-202ENST00000409333 SPSB4Q96A44 273 aa14.52□□□□□ -0.09
SSB-202ENST00000409333 FGGYQ96C11 551 aa14.52□□□□□ -0.09
SSB-202ENST00000409333 ADAT3Q96EY9 351 aaPredicted RBP14.52□□□□□ -0.09
SSB-202ENST00000409333 RGCCQ9H4X1 137 aa14.52□□□□□ -0.09
SSB-202ENST00000409333 EIF3KQ9UBQ5 218 aaKnown RBP14.52□□□□□ -0.09
SSB-202ENST00000409333 V9GYS6 101 aa14.52□□□□□ -0.09
SSB-202ENST00000409333 hCG_38984A0A1B0GV85 526 aa14.51□□□□□ -0.09
SSB-202ENST00000409333 CD2P06729 351 aa14.51□□□□□ -0.09
SSB-202ENST00000409333 CLEC2LP0C7M8 214 aa14.51□□□□□ -0.09
SSB-202ENST00000409333 ACKR3P25106 362 aa14.51□□□□□ -0.09
SSB-202ENST00000409333 RPS19P39019 145 aaKnown RBP14.51□□□□□ -0.09
SSB-202ENST00000409333 UCP2P55851 309 aa14.51□□□□□ -0.09
SSB-202ENST00000409333 FAM3AP98173 230 aa14.51□□□□□ -0.09
SSB-202ENST00000409333 SORDQ00796 357 aa14.51□□□□□ -0.09
SSB-202ENST00000409333 Q6ZSR3 168 aa14.51□□□□□ -0.09
SSB-202ENST00000409333 PHYHIPQ92561 330 aa14.51□□□□□ -0.09
SSB-202ENST00000409333 NPDC1Q9NQX5 325 aaPredicted RBP14.51□□□□□ -0.09
SSB-202ENST00000409333 ZNF391Q9UJN7 358 aa14.51□□□□□ -0.09
SSB-202ENST00000409333 TRAV8-7A0A075B6U6 113 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 SRMP19623 302 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 MYL9P24844 172 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 MTNR1BP49286 362 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 GSK3AP49840 483 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 PPP1CBP62140 327 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 MALLQ13021 153 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 DYNC2LI1Q8TCX1 351 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 AKAP1Q92667 903 aaKnown RBP eCLIP14.5□□□□□ -0.09
SSB-202ENST00000409333 THRSPQ92748 146 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 TPK1Q9H3S4 243 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 PLEKHA1Q9HB21 404 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 TAS2R4Q9NYW5 299 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 PIGLQ9Y2B2 252 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 UBR5O95071 2799 aaPredicted RBP14.5□□□□□ -0.09
SSB-202ENST00000409333 USP9XQ93008 2570 aaPredicted RBP14.5□□□□□ -0.09
SSB-202ENST00000409333 J3QW42 95 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 CASKO14936 926 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 NCR1O76036 304 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 RAF1P04049 648 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 FAHP16930 419 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 CD40P25942 277 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 CAV3P56539 151 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 OR8B8Q15620 311 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 SSX8Q7RTT4 187 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 PARP16Q8N5Y8 322 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 OR1J1Q8NGS3 322 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 REPIN1Q9BWE0 567 aaKnown RBP14.5□□□□□ -0.09
SSB-202ENST00000409333 OR2J1Q9GZK6 312 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 SNTG1Q9NSN8 517 aa14.5□□□□□ -0.09
SSB-202ENST00000409333 TRAV1-2A0A0B4J238 106 aa14.49□□□□□ -0.09
SSB-202ENST00000409333 LOC390937A0A1W2PQ73 354 aa14.49□□□□□ -0.09
SSB-202ENST00000409333 MTRF1O75570 445 aaKnown RBP14.49□□□□□ -0.09
SSB-202ENST00000409333 CRYAAP02489 173 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms