RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 LIPKQ5VXJ0 399 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 OR2T2Q6IF00 324 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 MRPL21Q7Z2W9 205 aaKnown RBP12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 ELMOD2Q8IZ81 293 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 SVOPQ8N4V2 548 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 NUP37Q8NFH4 326 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 OR51A4Q8NGJ6 313 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 OPALINQ96PE5 141 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 MRPL37Q9BZE1 423 aaKnown RBP12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 PPP1R3EQ9H7J1 279 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 VCX3AQ9NNX9 186 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 CACNA1DQ01668 2161 aa12.1□□□□□ -0.47
CHRNA1-204ENST00000409323 OR4C45A6NMZ5 311 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 KRTAP10-9P60411 292 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 MALLQ13021 153 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 PSG7Q13046 419 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 INSL4Q14641 139 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 TSTQ16762 297 aaKnown RBP12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 PGAP1Q75T13 922 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 ZNF676Q8N7Q3 588 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 OR52H1Q8NGJ2 320 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 OR5L1Q8NGL2 311 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 OR5AK2Q8NH90 309 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 DVL3Q92997 716 aaPredicted RBP12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 TMEM203Q969S6 136 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 MGLLQ99685 303 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 LIME1Q9H400 295 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 CMAHPQ9Y471 501 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 LOC107986453A0A1B0GWG9 222 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 FAM221AA4D161 298 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 HS3ST1O14792 307 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 XRCC2O43543 280 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 ICMTO60725 284 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 ACKR3P25106 362 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 GCH1P30793 250 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 ALDH3B1P43353 468 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 TNK1Q13470 666 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 ZNF718Q3SXZ3 478 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 ARMCX4Q5H9R4 360 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 RPL22L1Q6P5R6 122 aaKnown RBP12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 ZNF367Q7RTV3 350 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 GPR141Q7Z602 305 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 ZCCHC24Q8N2G6 241 aaKnown RBP12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 OR56B2PQ8NGI1 322 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 ZNF420Q8TAQ5 688 aaPredicted RBP12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 SYNPRQ8TBG9 265 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 RGP1Q92546 391 aaPredicted RBP12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 FCGR1BQ92637 280 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 GHSRQ92847 366 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 FBXW5Q969U6 566 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 MYCBPQ99417 103 aaPredicted RBP12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 TMED9Q9BVK6 235 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 MOB1AQ9H8S9 216 aa12.09□□□□□ -0.47
CHRNA1-204ENST00000409323 LRBAP50851 2863 aa12.08□□□□□ -0.47
CHRNA1-204ENST00000409323 RAI1Q7Z5J4 1906 aaPredicted RBP12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 DSCAMO60469 2012 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 A0A1B0GTI1 187 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 hCG_38984A0A1B0GV85 526 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 A0A1W2PPW3 197 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 GGT3PA6NGU5 568 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 OGG1O15527 345 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 TIMM8AO60220 97 aaPredicted RBP12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 SOD3P08294 240 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 SOX2P48431 317 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 TGM4P49221 684 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 FAM3AP98173 230 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 DMKNQ6E0U4 476 aaPredicted RBP12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 FDX2Q6P4F2 183 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 MRPL24Q96A35 216 aaKnown RBP12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 ORAI1Q96D31 301 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 SMIM19Q96E16 107 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 PGLYRP3Q96LB9 341 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 DHRS9Q9BPW9 319 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 PLK3Q9H4B4 646 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 MSL2Q9HCI7 577 aa12.08□□□□□ -0.48
CHRNA1-204ENST00000409323 A0A1B0GVI7 797 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 SYT7O43581 403 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 FAHP16930 419 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 APOBEC3AP31941 199 aaPredicted RBP12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 SERPINF1P36955 418 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 RBMXP38159 391 aaKnown RBP12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 LIPAP38571 399 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 GSK3AP49840 483 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 GP2P55259 537 aaKnown RBP12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 KLF3P57682 345 aaPredicted RBP12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 RPS23P62266 143 aaKnown RBP12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 RPS25P62851 125 aaKnown RBP12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 HNRNPA0Q13151 305 aaKnown RBP12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 SSX1Q16384 188 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 CCDC58Q4VC31 144 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 UNQ6126/PRO20091Q6UXV3 157 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 FBXW12Q6X9E4 464 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 MUC15Q8N387 334 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 UFD1Q92890 307 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 COG8Q96MW5 612 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 REPIN1Q9BWE0 567 aaKnown RBP12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 COMMD4Q9H0A8 199 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 ZNF442Q9H7R0 627 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 PLEKHF2Q9H8W4 249 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 SP140LQ9H930 580 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms