RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 RASD2Q96D21 266 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 NOL4LQ96MY1 436 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-203ENST00000409050 SIGLEC11Q96RL6 698 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 SLC35B3Q9H1N7 401 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 AUNIPQ9H7T9 357 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 Q9N2K0 584 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 UQCC1Q9NVA1 299 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 THYN1Q9P016 225 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 CRYBG1Q9Y4K1 1723 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 HSD17B6O14756 317 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 SIAH2O43255 324 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 COX7A2P2O60397 106 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 CRYABP02511 175 aaKnown RBP5.52□□□□□ -1.53
SCN1A-203ENST00000409050 SMIM17P0DL12 118 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 FABP9Q0Z7S8 132 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 PHLDA2Q53GA4 152 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 TTC9BQ8N6N2 239 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 TMEM217Q8N7C4 229 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 TMEM99Q8N816 258 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 OR1L1Q8NH94 360 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 OTOSQ8NHW6 89 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 TMED6Q8WW62 240 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 PIGTQ969N2 578 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 WBP2Q969T9 261 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 MRPL38Q96DV4 380 aaKnown RBP5.52□□□□□ -1.53
SCN1A-203ENST00000409050 MYOZ1Q9NP98 299 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-203ENST00000409050 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-203ENST00000409050 PISDQ9UG56 409 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 CLEC2DQ9UHP7 191 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 TIMM9Q9Y5J7 89 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 MYH8P13535 1937 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 A0A087WUJ7 227 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 OR2T8A6NH00 312 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 OR5B21A6NL26 309 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 MEIS3P2A8K0S8 358 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 DCTN6O00399 190 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 IL2RAP01589 272 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 HIST1H1CP16403 213 aaKnown RBP5.52□□□□□ -1.53
SCN1A-203ENST00000409050 SLC6A1P30531 599 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 POLR2IP36954 125 aaKnown RBP5.52□□□□□ -1.53
SCN1A-203ENST00000409050 CLDN2P57739 230 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 RPL18Q07020 188 aaKnown RBP5.52□□□□□ -1.53
SCN1A-203ENST00000409050 OR2T2Q6IF00 324 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 UBALD2Q8IYN6 164 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 OR6C1Q96RD1 312 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 B9D1Q9UPM9 204 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 RGPD8O14715 1765 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-203ENST00000409050 TRGV10A0A0A0MS01 117 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 A0A0B4J203 849 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 NKX2-2O95096 273 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 DUS4LO95620 317 aaKnown RBP5.52□□□□□ -1.53
SCN1A-203ENST00000409050 PNPP00491 289 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 PVRP15151 417 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 F2RP25116 425 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 EDDM3BP56851 147 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 RHOBP62745 196 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 GNG3P63215 75 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 VAMP3Q15836 100 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 PSMG4Q5JS54 123 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 OR8G2PQ6IF36 304 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 Q6ZPB1 254 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-203ENST00000409050 UBE3DQ7Z6J8 389 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 NKAIN4Q8IVV8 208 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 LRRC3BQ96PB8 259 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 MARVELD1Q9BSK0 173 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 TWSG1Q9GZX9 223 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 LPAR3Q9UBY5 353 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 CDC42EP3Q9UKI2 254 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 HCFC2Q9Y5Z7 792 aa5.52□□□□□ -1.53
SCN1A-203ENST00000409050 MYH3P11055 1940 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 DNPH1O43598 174 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 INHBBP09529 407 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 GLRA1P23415 457 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 P2RY1P47900 373 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 TMEM241Q24JQ0 296 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 PTX4Q96A99 478 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 POM121Q96HA1 1249 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 REEP6Q96HR9 211 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 ABHD14BQ96IU4 210 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 MRGPRX3Q96LB0 322 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 NMES1Q9C002 83 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 ZNF385DQ9H6B1 395 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 GPR84Q9NQS5 396 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 LSM2Q9Y333 95 aaKnown RBP5.51□□□□□ -1.53
SCN1A-203ENST00000409050 UBR2Q8IWV8 1755 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 MYH1P12882 1939 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 CCDC187A0A096LP49 1063 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 A0A1W2PN81 502 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 A0A1W2PR48 441 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 CLEC18AA5D8T8 446 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 MYADML2A6NDP7 307 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 FAM24AA6NFZ4 105 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 MMP9P14780 707 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 BMP5P22003 454 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 ARNTP27540 789 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 CHRNA7P36544 502 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 ZNF154Q13106 437 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 ZNF766Q5HY98 468 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 ACSM5Q6NUN0 579 aa5.51□□□□□ -1.53
SCN1A-203ENST00000409050 MARCH3Q86UD3 253 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms