RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 DGCR14Q96DF8 476 aaKnown RBP17.66■□□□□ 0.42
CHKB-201ENST00000406938 DERL3Q96Q80 235 aa17.66■□□□□ 0.42
CHKB-201ENST00000406938 PPIL3Q9H2H8 161 aaKnown RBP17.66■□□□□ 0.42
CHKB-201ENST00000406938 POFUT1Q9H488 388 aa17.66■□□□□ 0.42
CHKB-201ENST00000406938 PTTG3PQ9NZH4 202 aa17.66■□□□□ 0.42
CHKB-201ENST00000406938 ZNF391Q9UJN7 358 aa17.66■□□□□ 0.42
CHKB-201ENST00000406938 A0A1W2PPK0 400 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 LMX1BO60663 402 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 ATE1O95260 518 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 RNF224P0DH78 156 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 MAPK3P27361 379 aaPredicted RBP17.65■□□□□ 0.42
CHKB-201ENST00000406938 UCP2P55851 309 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 PRSS12P56730 875 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 MALLQ13021 153 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 UNQ9370/PRO34162Q6UXP9 181 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 PLPP7Q8NBV4 271 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 AKAP1Q92667 903 aaKnown RBP eCLIP17.65■□□□□ 0.42
CHKB-201ENST00000406938 NGBQ9NPG2 151 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 UBR5O95071 2799 aaPredicted RBP17.65■□□□□ 0.42
CHKB-201ENST00000406938 hCG_38984A0A1B0GV85 526 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 DHRS3O75911 302 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 EPXP11678 715 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 ERVS71-1P61550 626 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 PPP1CBP62140 327 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 GK2Q14410 553 aaPredicted RBP17.65■□□□□ 0.42
CHKB-201ENST00000406938 SPATA46Q5T0L3 261 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 OR5L1Q8NGL2 311 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 ORAI1Q96D31 301 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 NOX4Q9NPH5 578 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 GSTK1Q9Y2Q3 226 aa17.65■□□□□ 0.42
CHKB-201ENST00000406938 DPRXA6NFQ7 191 aa17.64■□□□□ 0.41
CHKB-201ENST00000406938 ATP6V1G2-DDX39BF2Z307 99 aa17.64■□□□□ 0.41
CHKB-201ENST00000406938 PIN1P1O15428 100 aa17.64■□□□□ 0.41
CHKB-201ENST00000406938 UCHL1P09936 223 aa17.64■□□□□ 0.41
CHKB-201ENST00000406938 PTAFRP25105 342 aa17.64■□□□□ 0.41
CHKB-201ENST00000406938 CALRP27797 417 aaKnown RBP17.64■□□□□ 0.41
CHKB-201ENST00000406938 BSPH1Q075Z2 132 aa17.64■□□□□ 0.41
CHKB-201ENST00000406938 HLXQ14774 488 aaPredicted RBP17.64■□□□□ 0.41
CHKB-201ENST00000406938 PAMR1Q6UXH9 720 aa17.64■□□□□ 0.41
CHKB-201ENST00000406938 OR1J1Q8NGS3 322 aa17.64■□□□□ 0.41
CHKB-201ENST00000406938 OR14K1Q8NGZ2 314 aa17.64■□□□□ 0.41
CHKB-201ENST00000406938 NDNFQ8TB73 568 aa17.64■□□□□ 0.41
CHKB-201ENST00000406938 THRSPQ92748 146 aa17.64■□□□□ 0.41
CHKB-201ENST00000406938 KCTD7Q96MP8 289 aa17.64■□□□□ 0.41
CHKB-201ENST00000406938 ZNF275Q9NSD4 429 aaPredicted RBP17.64■□□□□ 0.41
CHKB-201ENST00000406938 V9GYS6 101 aa17.64■□□□□ 0.41
CHKB-201ENST00000406938 HCFC1P51610 2035 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 TRBV5-7A0A0A0MS05 114 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 LOC390937A0A1W2PQ73 354 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 WIPF3A6NGB9 483 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 SLC22A1O15245 554 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 MTRF1O75570 445 aaKnown RBP17.63■□□□□ 0.41
CHKB-201ENST00000406938 CD2P06729 351 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 ZNF12P17014 697 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 CFL1P23528 166 aaKnown RBP17.63■□□□□ 0.41
CHKB-201ENST00000406938 RAD52P43351 418 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 FAM3AP98173 230 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 SPCS2Q15005 226 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 UNQ6126/PRO20091Q6UXV3 157 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 Q6ZSR3 168 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 MRPL21Q7Z2W9 205 aaKnown RBP17.63■□□□□ 0.41
CHKB-201ENST00000406938 PHYHIPQ92561 330 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 PLEKHA1Q9HB21 404 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 MYO18BQ8IUG5 2567 aa17.63■□□□□ 0.41
CHKB-201ENST00000406938 ABCD4O14678 606 aa17.62■□□□□ 0.41
CHKB-201ENST00000406938 ARL6IP5O75915 188 aa17.62■□□□□ 0.41
CHKB-201ENST00000406938 ACKR3P25106 362 aa17.62■□□□□ 0.41
CHKB-201ENST00000406938 GSK3AP49840 483 aa17.62■□□□□ 0.41
CHKB-201ENST00000406938 SNTB2Q13425 540 aaKnown RBP17.62■□□□□ 0.41
CHKB-201ENST00000406938 TNK1Q13470 666 aa17.62■□□□□ 0.41
CHKB-201ENST00000406938 OR8B8Q15620 311 aa17.62■□□□□ 0.41
CHKB-201ENST00000406938 HSD17B12Q53GQ0 312 aa17.62■□□□□ 0.41
CHKB-201ENST00000406938 PGAP1Q75T13 922 aa17.62■□□□□ 0.41
CHKB-201ENST00000406938 PIAS4Q8N2W9 510 aaPredicted RBP17.62■□□□□ 0.41
CHKB-201ENST00000406938 CCDC54Q8NEL0 328 aa17.62■□□□□ 0.41
CHKB-201ENST00000406938 ADAT3Q96EY9 351 aaPredicted RBP17.62■□□□□ 0.41
CHKB-201ENST00000406938 DACH2Q96NX9 599 aa17.62■□□□□ 0.41
CHKB-201ENST00000406938 REPIN1Q9BWE0 567 aaKnown RBP17.62■□□□□ 0.41
CHKB-201ENST00000406938 BCL2L14Q9BZR8 327 aa17.62■□□□□ 0.41
CHKB-201ENST00000406938 OR2J1Q9GZK6 312 aa17.62■□□□□ 0.41
CHKB-201ENST00000406938 OPA3Q9H6K4 179 aa17.62■□□□□ 0.41
CHKB-201ENST00000406938 SHISA3A0PJX4 238 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 A6NIN4 97 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 C19orf84I3L1E1 186 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 RAF1P04049 648 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 PLA2G2AP14555 144 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 ZNF20P17024 532 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 SRSF1Q07955 248 aaKnown RBP eCLIP17.61■□□□□ 0.41
CHKB-201ENST00000406938 SEMA6DQ8NFY4 1073 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 SLC25A40Q8TBP6 338 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 FGGYQ96C11 551 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 RADILQ96JH8 1075 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 ESRP2Q9H6T0 727 aaKnown RBP17.61■□□□□ 0.41
CHKB-201ENST00000406938 FLNCQ14315 2725 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 ANKRD61A6NGH8 418 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 FAHP16930 419 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 NCMAPQ5T1S8 102 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 ASPHD2Q6ICH7 369 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 FBXW12Q6X9E4 464 aa17.61■□□□□ 0.41
CHKB-201ENST00000406938 USP43Q70EL4 1123 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms