RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TMEM38AQ9H6F2 299 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 CD209Q9NNX6 404 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 ASCL3Q9NQ33 180 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 DUX4Q9UBX2 424 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 TP53TG3Q9ULZ0 132 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 PSMD13Q9UNM6 376 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 YARS2Q9Y2Z4 477 aaKnown RBP3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 CEMIPQ8WUJ3 1361 aa3.46□□□□□ -1.86
HMGB1P13-201ENST00000406019 NRCAMQ92823 1304 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 PPIP5K1Q6PFW1 1433 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 GNG14A0A1W2PPG7 69 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 TSPAN11A1L157 253 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 FABP12A6NFH5 140 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 LRRN3E7EW58 273 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 B4GALT5O43286 388 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 SNAI2O43623 268 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 NPIPB7O75200 414 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 FARS2O95363 451 aaKnown RBP3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 PLEKHA8P1O95397 391 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 TGFBR2P37173 567 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 GPR1P46091 355 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 AP3S2P59780 193 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 ERVS71-1P61550 626 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 PSPHP78330 225 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 REG3AQ06141 175 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 TWF1Q12792 350 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 USF2Q15853 346 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 UAP1Q16222 522 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 PSMD5Q16401 504 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 GOLGA7BQ2TAP0 167 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 LRRC10Q5BKY1 277 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 UBE2UQ5VVX9 321 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 KHDRBS2Q5VWX1 349 aaKnown RBP3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 IDO2Q6ZQW0 420 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 RNF165Q6ZSG1 346 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 ABHD12BQ7Z5M8 362 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 RBM45Q8IUH3 476 aaKnown RBP3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 BBS7Q8IWZ6 715 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 GATSQ8NAP1 163 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 C20orf203Q8NBC4 194 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 OR51L1Q8NGJ5 315 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 KCTD4Q8WVF5 259 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 FAM151AQ8WW52 585 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 PIH1D2Q8WWB5 315 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 AURKBQ96GD4 344 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 B3GALT6Q96L58 329 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZIM3Q96PE6 472 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 C7orf50Q9BRJ6 194 aaKnown RBP3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 SLC22A4Q9H015 551 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 DEFB129Q9H1M3 183 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 CSNK1G1Q9HCP0 422 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZC4H2Q9NQZ6 224 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 CTPS2Q9NRF8 586 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 PARVAQ9NVD7 372 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 ADA2Q9NZK5 511 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 ADAM22Q9P0K1 906 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 ST3GAL6Q9Y274 331 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 TBL2Q9Y4P3 447 aaKnown RBP3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 F11RQ9Y624 299 aaKnown RBP3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 LRPPRCP42704 1394 aaKnown RBP3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 DENND4AQ7Z401 1863 aa3.45□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZNF318Q5VUA4 2279 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 MAP3K5Q99683 1374 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 IBTKQ9P2D0 1353 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZNF233A6NK53 670 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 SMIM23A6NLE4 172 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 PEX7O00628 323 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 NOS1APO75052 506 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 SNAP29O95721 258 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 LSM8O95777 96 aaKnown RBP3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 MOSP00540 346 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 GP1BAP07359 652 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 SMIM10L1P0DMW3 83 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 PSMB5P28074 263 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 TEAD1P28347 426 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 HTR1EP28566 365 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 AP1S2P56377 157 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 IFFO1Q0D2I5 559 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 EXOC3L4Q17RC7 722 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 C18orf21Q32NC0 220 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 HES5Q5TA89 166 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 LINC00336Q6ZUF6 198 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 TMEM179Q6ZVK1 233 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 SLC35D2Q76EJ3 337 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 TGIF2LYQ8IUE0 185 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 CBLN2Q8IUK8 224 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZBED8Q8IZ13 594 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 FBXO36Q8NEA4 188 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 NPBQ8NG41 125 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 OR13C9Q8NGT0 318 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 OR6X1Q8NH79 312 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 ACTRT1Q8TDG2 376 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 DCUN1D4Q92564 292 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 EEF1AKMT3Q96AZ1 226 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 SMIM10Q96HG1 83 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 RNF145Q96MT1 663 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 CTRCQ99895 268 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 GABARAPL3Q9BY60 117 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 ASB7Q9H672 318 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 SLC38A10Q9HBR0 1119 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms