RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 TAF13Q15543 124 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 PCK2Q16822 640 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 KRTAP24-1Q3LI83 254 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 KLHL12Q53G59 568 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 PRAMEF6Q5VXH4 476 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 SLC27A4Q6P1M0 643 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 PLBD1Q6P4A8 553 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 PGAP1Q75T13 922 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 MRPL21Q7Z2W9 205 aaKnown RBP4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 PEG10Q86TG7 708 aaKnown RBP4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 MOGAT3Q86VF5 341 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 CPOQ8IVL8 374 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 PAPD5Q8NDF8 572 aaKnown RBP4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 C19orf18Q8NEA5 215 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR13G1Q8NGZ3 307 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 SPRYD4Q8WW59 207 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 POP5Q969H6 163 aaKnown RBP4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 SPTSSAQ969W0 71 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 RAB39BQ96DA2 213 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 INTS14Q96SY0 518 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 SLC30A2Q9BRI3 323 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 ABHD6Q9BV23 337 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 METTL17Q9H7H0 456 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZNF556Q9HAH1 456 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 GCM1Q9NP62 436 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 G6PC2Q9NQR9 355 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 DDX28Q9NUL7 540 aaKnown RBP4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 UFSP2Q9NUQ7 469 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 TMEM100Q9NV29 134 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 DNAJC27Q9NZQ0 273 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 IL19Q9UHD0 177 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 KLHDC2Q9Y2U9 406 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 DOCK11Q5JSL3 2073 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 TRAV20A0A0B4J274 112 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 GGT3PA6NGU5 568 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZNF878C9JN71 531 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 PRR23D1E9PI22 279 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 TBX1O43435 398 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 FAM20BO75063 409 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 PNPP00491 289 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 ANXA2P07355 339 aaKnown RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 MRPL3P09001 348 aaKnown RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 PRR23D2P0DMB1 279 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 ANXA8P13928 327 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 PAICSP22234 425 aaKnown RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 EPHA2P29317 976 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 OTX1P32242 354 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 MDH2P40926 338 aaKnown RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 CX3CR1P49238 355 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 SRP9P49458 86 aaKnown RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 DAPP51397 102 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 HCCSP53701 268 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 RPS7P62081 194 aaKnown RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 CDK5Q00535 292 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 MAB21L1Q13394 359 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 MPPED2Q15777 294 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 GFOD2Q3B7J2 385 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 TEX30Q5JUR7 227 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 C1orf146Q5VVC0 180 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 DCAF12L2Q5VW00 463 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 FAHD1Q6P587 224 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 SHQ1Q6PI26 577 aaKnown RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 DRAM2Q6UX65 266 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 FAM57BQ71RH2 274 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 BCDIN3DQ7Z5W3 292 aaKnown RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 AMIGO2Q86SJ2 522 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 LRRC28Q86X40 367 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 TIGD4Q8IY51 512 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 BOLLQ8N9W6 283 aaKnown RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 DEFB108BQ8NET1 73 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR56B2PQ8NGI1 322 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 THEM6Q8WUY1 208 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 RNF133Q8WVZ7 376 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 KCNJ15Q99712 375 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 ADAT1Q9BUB4 502 aaKnown RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 TTTY10Q9BZA0 68 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 PPP1R3EQ9H7J1 279 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 YY1AP1Q9H869 796 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 MARCH7Q9H992 704 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 PATZ1Q9HBE1 687 aaKnown RBP4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 SLC25A19Q9HC21 320 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 MMP26Q9NRE1 261 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 TVP23BQ9NYZ1 205 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 KIF17Q9P2E2 1029 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZNF319Q9P2F9 582 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 PCDHB10Q9UN67 800 aa4.84□□□□□ -1.63
HMGB1P20-201ENST00000402555 A0A0G2JMP0 313 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 A0A0X1KG70 313 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 A0A1B0GWJ7 208 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 CCDC182A6NF36 153 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 CEACAM18A8MTB9 384 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 PRR32B1ATL7 298 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 F5H0A9 414 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 TRAPPC2LH3BP13 241 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 PSMD9O00233 223 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 PRKYO43930 277 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 EIF4EBP3O60516 100 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 HMGN1P05114 100 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms