RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 OR2A2Q6IF42 318 aa22.3■■□□□ 1.16
CPNE1-205ENST00000401607 VWA1Q6PCB0 445 aa22.3■■□□□ 1.16
CPNE1-205ENST00000401607 SEM1Q6ZVN7 128 aa22.3■■□□□ 1.16
CPNE1-205ENST00000401607 S100A16Q96FQ6 103 aaKnown RBP22.3■■□□□ 1.16
CPNE1-205ENST00000401607 REEP6Q96HR9 211 aa22.3■■□□□ 1.16
CPNE1-205ENST00000401607 METTL17Q9H7H0 456 aaPredicted RBP22.3■■□□□ 1.16
CPNE1-205ENST00000401607 TMEM272A0A1B0GTI8 110 aa22.29■■□□□ 1.16
CPNE1-205ENST00000401607 LANCL1O43813 399 aa22.29■■□□□ 1.16
CPNE1-205ENST00000401607 THBS4P35443 961 aa22.29■■□□□ 1.16
CPNE1-205ENST00000401607 ARR3P36575 388 aa22.29■■□□□ 1.16
CPNE1-205ENST00000401607 RFX2P48378 723 aa22.29■■□□□ 1.16
CPNE1-205ENST00000401607 RAB1AP62820 205 aa22.29■■□□□ 1.16
CPNE1-205ENST00000401607 PITPNAQ00169 270 aa22.29■■□□□ 1.16
CPNE1-205ENST00000401607 FOXF2Q12947 444 aa22.29■■□□□ 1.16
CPNE1-205ENST00000401607 BIVMQ86UB2 503 aa22.29■■□□□ 1.16
CPNE1-205ENST00000401607 CNEP1R1Q8N9A8 125 aa22.29■■□□□ 1.16
CPNE1-205ENST00000401607 OR6K3Q8NGY3 331 aa22.29■■□□□ 1.16
CPNE1-205ENST00000401607 ZFP3Q96NJ6 502 aa22.29■■□□□ 1.16
CPNE1-205ENST00000401607 SORCS2Q96PQ0 1159 aa22.29■■□□□ 1.16
CPNE1-205ENST00000401607 CNTD2Q9H8S5 307 aa22.29■■□□□ 1.16
CPNE1-205ENST00000401607 MGAQ8IWI9 3026 aa22.28■■□□□ 1.16
CPNE1-205ENST00000401607 IGKV1-9A0A0C4DH69 117 aa22.28■■□□□ 1.16
CPNE1-205ENST00000401607 MTRF1O75570 445 aaKnown RBP22.28■■□□□ 1.16
CPNE1-205ENST00000401607 FAHP16930 419 aa22.28■■□□□ 1.16
CPNE1-205ENST00000401607 IGHV1-2P23083 117 aa22.28■■□□□ 1.16
CPNE1-205ENST00000401607 MMP15P51511 669 aa22.28■■□□□ 1.16
CPNE1-205ENST00000401607 ZNF324BQ6AW86 544 aaPredicted RBP22.28■■□□□ 1.16
CPNE1-205ENST00000401607 FAM180AQ6UWF9 173 aa22.28■■□□□ 1.16
CPNE1-205ENST00000401607 RNF144BQ7Z419 303 aa22.28■■□□□ 1.16
CPNE1-205ENST00000401607 Q8NA96 180 aa22.28■■□□□ 1.16
CPNE1-205ENST00000401607 C19orf18Q8NEA5 215 aa22.28■■□□□ 1.16
CPNE1-205ENST00000401607 THAP7Q9BT49 309 aaPredicted RBP22.28■■□□□ 1.16
CPNE1-205ENST00000401607 C1QTNF5Q9BXJ0 243 aa22.28■■□□□ 1.16
CPNE1-205ENST00000401607 C11orf54Q9H0W9 315 aaPredicted RBP22.28■■□□□ 1.16
CPNE1-205ENST00000401607 DOCK7Q96N67 2140 aa22.28■■□□□ 1.16
CPNE1-205ENST00000401607 RTTNQ86VV8 2226 aa22.28■■□□□ 1.16
CPNE1-205ENST00000401607 ACACAQ13085 2346 aa22.28■■□□□ 1.16
CPNE1-205ENST00000401607 MBD3L4A6NDZ8 208 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-205ENST00000401607 MBD3L3A6NE82 208 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-205ENST00000401607 MBD3L5A6NJ08 208 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-205ENST00000401607 LDLRAD4O15165 306 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 CTDSPLO15194 276 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 ERCC1P07992 297 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-205ENST00000401607 EDN3P14138 238 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 CDK2P24941 298 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 TBRG1Q3YBR2 411 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 RTL6Q6ICC9 239 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 TMEM53Q6P2H8 277 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 COLCA1Q6ZS62 124 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 MBD3L2Q8NHZ7 208 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-205ENST00000401607 RFT1Q96AA3 541 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 UQCC2Q9BRT2 126 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 ZNF71Q9NQZ8 489 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-205ENST00000401607 RABL2AQ9UBK7 228 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-205ENST00000401607 RABL2BQ9UNT1 228 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 PIGLQ9Y2B2 252 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 EEF1E1O43324 174 aaKnown RBP22.27■■□□□ 1.16
CPNE1-205ENST00000401607 ARSBP15848 533 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 ACKR3P25106 362 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 PTH2RP49190 550 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 UCNP55089 124 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 NRARPQ7Z6K4 114 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 DPPA2Q7Z7J5 298 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 ZNF584Q8IVC4 421 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 C10orf35Q96D05 121 aa22.27■■□□□ 1.16
CPNE1-205ENST00000401607 CTAG2O75638 210 aa22.26■■□□□ 1.15
CPNE1-205ENST00000401607 STOMP27105 288 aa22.26■■□□□ 1.15
CPNE1-205ENST00000401607 DGCR2P98153 550 aa22.26■■□□□ 1.15
CPNE1-205ENST00000401607 TNK1Q13470 666 aa22.26■■□□□ 1.15
CPNE1-205ENST00000401607 KRTCAP3Q53RY4 240 aa22.26■■□□□ 1.15
CPNE1-205ENST00000401607 Q6ZT83 130 aa22.26■■□□□ 1.15
CPNE1-205ENST00000401607 SSC4DQ8WTU2 575 aa22.26■■□□□ 1.15
CPNE1-205ENST00000401607 YIPF5Q969M3 257 aa22.26■■□□□ 1.15
CPNE1-205ENST00000401607 CHST5Q9GZS9 411 aa22.26■■□□□ 1.15
CPNE1-205ENST00000401607 DHRS7CA6NNS2 312 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 CNOT4O95628 575 aaKnown RBP22.25■■□□□ 1.15
CPNE1-205ENST00000401607 TPOP07202 933 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 CCL2P13500 99 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 ZNF93P35789 620 aaPredicted RBP22.25■■□□□ 1.15
CPNE1-205ENST00000401607 MNDAP41218 407 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 TMEM69Q5SWH9 247 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 CCBE1Q6UXH8 406 aaPredicted RBP22.25■■□□□ 1.15
CPNE1-205ENST00000401607 PP6455Q8WZ26 134 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 SPACA5Q96QH8 159 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 RGCCQ9H4X1 137 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 ZNF391Q9UJN7 358 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 DMXL2Q8TDJ6 3036 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 GSTZ1O43708 216 aaPredicted RBP22.25■■□□□ 1.15
CPNE1-205ENST00000401607 TNFSF13O75888 250 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 ALDOBP05062 364 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 GABRA1P14867 456 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 HOXD11P31277 338 aaPredicted RBP22.25■■□□□ 1.15
CPNE1-205ENST00000401607 PRSS12P56730 875 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 ZNF92Q03936 586 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 SF3B4Q15427 424 aaKnown RBP eCLIP22.25■■□□□ 1.151e-7■■■■■ 40
CPNE1-205ENST00000401607 UBE2V2Q15819 145 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 GSG1Q2KHT4 349 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 RNASE12Q5GAN4 147 aaKnown RBP22.25■■□□□ 1.15
CPNE1-205ENST00000401607 UTS2BQ765I0 119 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 CDH26Q8IXH8 852 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms