RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 OPRM1P35372 400 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 CX3CR1P49238 355 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 MEF2DQ14814 521 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 CHRFAM7AQ494W8 412 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 FAM74A3Q4VXF1 159 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 GUSBP11Q6P575 273 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 LYG2Q86SG7 212 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 PCDHB10Q9UN67 800 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 LSM5Q9Y4Y9 91 aaKnown RBP11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 CCDC163A0A0D9SF12 145 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 GPR31O00270 319 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 IGHV3-9P01782 118 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 ITGB2P05107 769 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 CEBPGP53567 150 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 UNC119Q13432 240 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 SNTB1Q13884 538 aaKnown RBP11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 C9orf135Q5VTT2 229 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 PNLDC1Q8NA58 520 aaKnown RBP11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 OR5M8Q8NGP6 311 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 MR1Q95460 341 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 A0A0D9SG52 128 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 MPTX1A8MV57 137 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 NME2P22392 152 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 LPAL2Q16609 132 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 TEX30Q5JUR7 227 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 TMEM71Q6P5X7 295 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 HAGHLQ6PII5 290 aaPredicted RBP11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 TRAPPC6AO75865 159 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 SERPINA5P05154 406 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 DBHP09172 617 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 BHLHE23Q8NDY6 225 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 FAM96BQ9Y3D0 163 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 C5orf63A6NC05 138 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 ADAM10O14672 748 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 TLX3O43711 291 aaPredicted RBP11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 UBBP0CG47 229 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 PNLIPP16233 465 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 AKR1C3P42330 323 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 RPS27AP62979 156 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 UBA52P62987 128 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 OR8B12Q8NGG6 310 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 ST7LQ8TDW4 575 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 LIPHQ8WWY8 451 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 GAREM1Q9H706 876 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 IGKV3D-11A0A0A0MRZ8 115 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 OR5H15A6NDH6 313 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 B3GALNT1O75752 331 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 MGMTP16455 207 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 ROM1Q03395 351 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 CDCP2Q5VXM1 449 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 ACOT7LQ6ZUV0 252 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 PEG10Q86TG7 708 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 B3GALT1Q9Y5Z6 326 aa11.24□□□□□ -0.61
PPP4R1-202ENST00000400555 DENND4AQ7Z401 1863 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 ZNF814B7Z6K7 855 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 NPIPA2E9PIF3 369 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 NPIPA3F8WFD2 350 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 MICBQ29980 383 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 ZFP82Q8N141 532 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 OR2AE1Q8NHA4 323 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 CDC6Q99741 560 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 URM1Q9BTM9 101 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 REG4Q9BYZ8 158 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 SCPEP1Q9HB40 452 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 ZNF319Q9P2F9 582 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 CACNA1DQ01668 2161 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 NUDT21O43809 227 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 ZFAND5O76080 213 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 CSTBP04080 98 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 GLB1P16278 677 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 PSMB6P28072 239 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 CASRP41180 1078 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 APOBEC1P41238 236 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 NXPH1P58417 271 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 GPR85P60893 370 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 SP6Q3SY56 376 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 ANKRD37Q7Z713 158 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 PLEKHJ1Q9NW61 149 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 ESPL1Q14674 2120 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 A0A1W2PR77 199 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 GUSBP08236 651 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 AFF3P51826 1226 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 NKAIN3Q8N8D7 197 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 OR6K3Q8NGY3 331 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 HDHD3Q9BSH5 251 aaPredicted RBP11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 GPR173Q9NS66 373 aa11.23□□□□□ -0.61
PPP4R1-202ENST00000400555 A0A0A6YYH2 397 aa11.22□□□□□ -0.61
PPP4R1-202ENST00000400555 A6NJ64 397 aa11.22□□□□□ -0.61
PPP4R1-202ENST00000400555 ZNF850A8MQ14 1090 aa11.22□□□□□ -0.61
PPP4R1-202ENST00000400555 EFNA2O43921 213 aa11.22□□□□□ -0.61
PPP4R1-202ENST00000400555 CNR1P21554 472 aa11.22□□□□□ -0.61
PPP4R1-202ENST00000400555 ANOS1P23352 680 aa11.22□□□□□ -0.61
PPP4R1-202ENST00000400555 DCDP81605 110 aaKnown RBP11.22□□□□□ -0.61
PPP4R1-202ENST00000400555 TAF9Q16594 264 aa11.22□□□□□ -0.61
PPP4R1-202ENST00000400555 CCDC36Q8IYA8 594 aa11.22□□□□□ -0.61
PPP4R1-202ENST00000400555 OR5L2Q8NGL0 311 aa11.22□□□□□ -0.61
PPP4R1-202ENST00000400555 MFSD8Q8NHS3 518 aa11.22□□□□□ -0.61
PPP4R1-202ENST00000400555 ZNF501Q96CX3 271 aaPredicted RBP11.22□□□□□ -0.61
PPP4R1-202ENST00000400555 MRPS24Q96EL2 167 aaKnown RBP11.22□□□□□ -0.61
PPP4R1-202ENST00000400555 MVB12AQ96EY5 273 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms