RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 AMMECR1Q9Y4X0 333 aaPredicted RBP7.87□□□□□ -1.15
CACNA1C-220ENST00000399655 TCRBP04435 133 aa7.87□□□□□ -1.15
CACNA1C-220ENST00000399655 OLIG2Q13516 323 aa7.87□□□□□ -1.15
CACNA1C-220ENST00000399655 SHBQ15464 509 aa7.87□□□□□ -1.15
CACNA1C-220ENST00000399655 OR51B4Q9Y5P0 310 aa7.87□□□□□ -1.15
CACNA1C-220ENST00000399655 NEO1Q92859 1461 aa7.87□□□□□ -1.15
CACNA1C-220ENST00000399655 ELFN2Q5R3F8 820 aa7.87□□□□□ -1.15
CACNA1C-220ENST00000399655 CAMKMTQ7Z624 323 aa7.87□□□□□ -1.15
CACNA1C-220ENST00000399655 WDR76Q9H967 626 aa7.87□□□□□ -1.15
CACNA1C-220ENST00000399655 GPR34Q9UPC5 381 aa7.87□□□□□ -1.15
CACNA1C-220ENST00000399655 POP7O75817 140 aaKnown RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 RGRP47804 291 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 JAG1P78504 1218 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 ZNF260Q3ZCT1 412 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 TXNDC8Q6A555 127 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 TMEM88Q6PEY1 159 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 C11orf40Q8WZ69 217 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 DTD2Q96FN9 168 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 FYTTD1Q96QD9 318 aaKnown RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 H3BMH7 237 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 TMEM37Q8WXS4 190 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 SEC22AQ96IW7 307 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 FOXC2Q99958 501 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 ACSS2Q9NR19 701 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 DUTP33316 252 aaKnown RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 PRLHRP49683 370 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 NPY4RP50391 375 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 C20orf27Q9GZN8 174 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 GEMIN7Q9H840 131 aaKnown RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 SH2D2AQ9NP31 389 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 GVINP1Q7Z2Y8 2422 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 SCN4AP35499 1836 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 NKX2-8O15522 239 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 GSTZ1O43708 216 aaPredicted RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 CLN3Q13286 438 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 ZFAND6Q6FIF0 208 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 TP53I13Q8NBR0 393 aaPredicted RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 NEUROG1Q92886 237 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 ASB16Q96NS5 453 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 UGGT1Q9NYU2 1555 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 POM121BA6NF01 834 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 C19orf67A6NJJ6 358 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 LOC730098B7Z3J9 87 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 RAG2P55895 527 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 HLA-DRB5Q30154 266 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 KRTCAP2Q8N6L1 136 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 OIT3Q8WWZ8 545 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 CTNSO60931 367 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 ZNF888P0CJ79 500 aaPredicted RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 SMIM10L2AP0DMW4 78 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 SMIM10L2BP0DMW5 78 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 FUT1P19526 365 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 RIPPLY3P57055 190 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 TMEM95Q3KNT9 176 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 KHDC3LQ587J8 217 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 THAP3Q8WTV1 239 aaPredicted RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 SNRNP40Q96DI7 357 aaKnown RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 FCF1Q9Y324 198 aaKnown RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 IER3IP1Q9Y5U9 82 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 SNRPGP15A8MWD9 76 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 SMPD2O60906 423 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 SDHAP31040 664 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 OR4D9Q8NGE8 314 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 TRPM1Q7Z4N2 1603 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 CCR5P51681 352 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 RAB38P57729 211 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 LHFPL2Q6ZUX7 228 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 IRF7Q92985 503 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 LPAR5Q9H1C0 372 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 CHST8Q9H2A9 424 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 DNAJB12Q9NXW2 375 aaKnown RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 FBXO4Q9UKT5 387 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 XRCC2O43543 280 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 RPS4Y1P22090 263 aaKnown RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 MSS51Q4VC12 460 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 HGDQ93099 445 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 NPFFR1Q9GZQ6 430 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 CES1P1Q9UKY3 287 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 PAM16Q9Y3D7 125 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 TOPBP1Q92547 1522 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 CCR6P51684 374 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 RBM11P57052 281 aaKnown RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 HYAL1Q12794 435 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 SMUG1Q53HV7 270 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 MEIG1Q5JSS6 88 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 VHLLQ6RSH7 139 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 NAT8LQ8N9F0 302 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 FAM181BA6NEQ2 426 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 HOXC4P09017 264 aaPredicted RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 EMX1Q04741 257 aaPredicted RBP7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 OR2Z1Q8NG97 314 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 CDCP1Q9H5V8 836 aa7.86□□□□□ -1.15
CACNA1C-220ENST00000399655 APCSP02743 223 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 ZNF788Q6ZQV5 615 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 ZNF689Q96CS4 500 aaPredicted RBP7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 EBF4Q9BQW3 602 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 MS4A6AQ9H2W1 248 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 AKAP11Q9UKA4 1901 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 PCNX1Q96RV3 2341 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 TRAV39A0A0B4J263 110 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms