RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 LINC00696Q6ZRV3 163 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 C10orf35Q96D05 121 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 FAHD2AQ96GK7 314 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 TAAR9Q96RI9 348 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 GSTZ1O43708 216 aaPredicted RBP7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 PCSK6P29122 969 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 AKR1C3P42330 323 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 CCL11P51671 97 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 EXOSC2Q13868 293 aaKnown RBP7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 ST8SIA2Q92186 375 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 HGDQ93099 445 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 LURAP1Q96LR2 239 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 FAM234AQ9H0X4 552 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 CYSLTR2Q9NS75 346 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 SLCO1C1Q9NYB5 712 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 ASH2LQ9UBL3 628 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 A4GNTQ9UNA3 340 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 PPP1R3CQ9UQK1 317 aa7.56□□□□□ -1.2
SPTLC3-201ENST00000399002 C5orf49A4QMS7 147 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 TMEM235A6NFC5 223 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 CCSO14618 274 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 PLPP2O43688 288 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 ZGLP1P0C6A0 271 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 SULT1A3P0DMM9 295 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 SULT1A4P0DMN0 295 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 PPP1CAP62136 330 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 NCR3LG1Q68D85 454 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 OR1N1Q8NGS0 311 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 CCDC74BQ96LY2 380 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 RNF2Q99496 336 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 FKBP11Q9NYL4 201 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 CXXC1Q9P0U4 656 aaPredicted RBP7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 TMED3Q9Y3Q3 217 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 ZC3H12DA2A288 527 aaKnown RBP7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 FIGNL2A6NMB9 653 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 DCTN6O00399 190 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 ARPC3O15145 178 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 NDUFB6O95139 128 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 PXNP49023 591 aaPredicted RBP7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 RAB7AP51149 207 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 THNSL2Q86YJ6 484 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 OR4S1Q8NGB4 309 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 OR5B3Q8NH48 314 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 SIGLEC11Q96RL6 698 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 CXCL16Q9H2A7 254 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 FBXO34Q9NWN3 711 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 ZNF727A8MUV8 499 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 SEC14L6B5MCN3 397 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 TNFSF11O14788 317 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 IL2RAP01589 272 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 OR5H8P0DN80 308 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 GABRA4P48169 554 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 CNN1P51911 297 aaKnown RBP7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 PIGPP57054 158 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 ZNF121P58317 390 aaPredicted RBP7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 TEX261Q6UWH6 196 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 GALMQ96C23 342 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 UFSP2Q9NUQ7 469 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 LOXL2Q9Y4K0 774 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 U3KQ87 197 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 DHHO43323 396 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 NKX2-2O95096 273 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 PDGFBP01127 241 aaPredicted RBP7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 CEACAM5P06731 702 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 CD37P11049 281 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 PTAFRP25105 342 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 SNRPNP63162 240 aaKnown RBP7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 EDDM3AQ14507 147 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 GPNMBQ14956 572 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 LPAL2Q16609 132 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 ATP6V1FQ16864 119 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 NHLRC1Q6VVB1 395 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 SUMF1Q8NBK3 374 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 POM121L2Q96KW2 1035 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 DOK1Q99704 481 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 IL20Q9NYY1 176 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 SLC22A13Q9Y226 551 aa7.55□□□□□ -1.2
SPTLC3-201ENST00000399002 SIRPB1O00241 398 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 TSPAN12O95859 305 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 CST4P01036 141 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 MBPP02686 304 aaPredicted RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 GP1BAP07359 652 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 CPN1P15169 458 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 NDUFB7P17568 137 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 FGF7P21781 194 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 GZMKP49863 264 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 SUMO1P63165 101 aaKnown RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 ZBTB37Q5TC79 503 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 NUFIP2Q7Z417 695 aaKnown RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 TRIB1Q96RU8 372 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 FAM173AQ9BQD7 235 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 OCEL1Q9H607 264 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 LANCL2Q9NS86 450 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 ATP23Q9Y6H3 246 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 SLC22A20A6NK97 555 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 SLC25A6P12236 298 aa7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 EIF3IQ13347 325 aaKnown RBP7.54□□□□□ -1.2
SPTLC3-201ENST00000399002 HES1Q14469 280 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms