RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 IL32P24001 234 aa16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 CFPP27918 469 aa16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 CAV3P56539 151 aa16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 OR10A3P58181 314 aa16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 MYPOPQ86VE0 399 aaPredicted RBP16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 OR6Q1Q8NGQ2 317 aa16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 ITFG2Q969R8 447 aa16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 APOBEC3DQ96AK3 386 aaPredicted RBP16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 ADAT3Q96EY9 351 aaPredicted RBP16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 USB1Q9BQ65 265 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 SLC30A2Q9BRI3 323 aa16.87■□□□□ 0.29
PDLIM2-205ENST00000397761 SMIM30A4D0T7 59 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 NOTOA8MTQ0 251 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 TMEM127O75204 238 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 NCR1O76036 304 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 CELA3BP08861 270 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 CCL2P13500 99 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 DDOSTP39656 456 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 C3orf36Q3SXR2 165 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 GLYATL3Q5SZD4 288 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 SFXN4Q6P4A7 337 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 PAQR4Q8N4S7 273 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 STEAP2Q8NFT2 490 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 AP3S1Q92572 193 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 S100PBPQ96BU1 408 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 FGGYQ96C11 551 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 KCTD12Q96CX2 325 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 C10orf35Q96D05 121 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 OR10A4Q9H209 315 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 TBCCD1Q9NVR7 557 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 CKLFQ9UBR5 152 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 BAHCC1Q9P281 2608 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 CCL21O00585 134 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 MTRF1O75570 445 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 INHBBP09529 407 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 EPXP11678 715 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 CCKARP32238 428 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 THBS2P35442 1172 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 WNT5AP41221 380 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 IDH3GP51553 393 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 MRPL49Q13405 166 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 DYNC1I2Q13409 638 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 TBC1D28Q2M2D7 210 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 COMMD2Q86X83 199 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 SERPINA12Q8IW75 414 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 AKAP1Q92667 903 aaKnown RBP eCLIP16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 REEP6Q96HR9 211 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 FAM71F1Q96KD3 344 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 TAS2R4Q9NYW5 299 aa16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 AK6Q9Y3D8 172 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-205ENST00000397761 hCG_38984A0A1B0GV85 526 aa16.85■□□□□ 0.29
PDLIM2-205ENST00000397761 PSMD7P51665 324 aa16.85■□□□□ 0.29
PDLIM2-205ENST00000397761 BMXP51813 675 aa16.85■□□□□ 0.29
PDLIM2-205ENST00000397761 FAM27E3Q08E93 113 aa16.85■□□□□ 0.29
PDLIM2-205ENST00000397761 TNK1Q13470 666 aa16.85■□□□□ 0.29
PDLIM2-205ENST00000397761 OR8B8Q15620 311 aa16.85■□□□□ 0.29
PDLIM2-205ENST00000397761 GFOD2Q3B7J2 385 aa16.85■□□□□ 0.29
PDLIM2-205ENST00000397761 SLC25A35Q3KQZ1 300 aa16.85■□□□□ 0.29
PDLIM2-205ENST00000397761 OR2AE1Q8NHA4 323 aa16.85■□□□□ 0.29
PDLIM2-205ENST00000397761 SMURF1Q9HCE7 757 aa16.85■□□□□ 0.29
PDLIM2-205ENST00000397761 PEX16Q9Y5Y5 336 aa16.85■□□□□ 0.29
PDLIM2-205ENST00000397761 CADP27708 2225 aa16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 MEGF11A6BM72 1044 aa16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 CCNOP22674 350 aa16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 ZNF92Q03936 586 aa16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 MOGQ16653 247 aa16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 FBXL19-AS1Q494R0 122 aa16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 PGAP1Q75T13 922 aa16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 KRT74Q7RTS7 529 aa16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 LYPD6Q86Y78 171 aa16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 ZNF101Q8IZC7 436 aa16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 OR5D14Q8NGL3 314 aa16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 ACOT12Q8WYK0 555 aa16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 REPIN1Q9BWE0 567 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 ACTR6Q9GZN1 396 aa16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 V9GY05 133 aa16.84■□□□□ 0.29
PDLIM2-205ENST00000397761 GCN1Q92616 2671 aaKnown RBP16.83■□□□□ 0.29
PDLIM2-205ENST00000397761 IFITM5A6NNB3 132 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 ALX3O95076 343 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 AGFG2O95081 481 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 NGFP01138 241 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 ZNF35P13682 527 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 ZNF20P17024 532 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 ATF1P18846 271 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 ACKR3P25106 362 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 CHRNB4P30926 498 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 THBS4P35443 961 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 FAM3AP98173 230 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 SEZ6L2Q6UXD5 910 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 SSX8Q7RTT4 187 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 ZNF843Q8N446 348 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 GALNT11Q8NCW6 608 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 PP6455Q8WZ26 134 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 C6orf62Q9GZU0 229 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 STARD10Q9Y365 291 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 HCFC1P51610 2035 aa16.83■□□□□ 0.28
PDLIM2-205ENST00000397761 C16orf97H3BN30 126 aa16.82■□□□□ 0.28
PDLIM2-205ENST00000397761 AIPO00170 330 aa16.82■□□□□ 0.28
PDLIM2-205ENST00000397761 CTDSP2O14595 271 aa16.82■□□□□ 0.28
PDLIM2-205ENST00000397761 MAS1P04201 325 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms