RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CUL9Q8IWT3 2517 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 E9PI62 339 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 UPK1BO75841 260 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 PTTG1O95997 202 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 TK1P04183 234 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 TNFRSF1AP19438 455 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 SFRP4Q6FHJ7 346 aaPredicted RBP7.31□□□□□ -1.24
PTPRD-204ENST00000397606 LAX1Q8IWV1 398 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 PARP16Q8N5Y8 322 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 DNAAF1Q8NEP3 725 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 RNF133Q8WVZ7 376 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 SNAPC3Q92966 411 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 KCNK17Q96T54 332 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 OR2H1Q9GZK4 316 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 PIGMQ9H3S5 423 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 SLC7A10Q9NS82 523 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 PCNX2A6NKB5 2137 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 NEURL1O76050 574 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 ATG12O94817 140 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 LPLP06858 475 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 PGA4P0DJD7 388 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 PGA3P0DJD8 388 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 ATF1P18846 271 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 PVALBP20472 110 aaPredicted RBP7.31□□□□□ -1.24
PTPRD-204ENST00000397606 SNRPD2P62316 118 aaKnown RBP7.31□□□□□ -1.24
PTPRD-204ENST00000397606 ZNF85Q03923 595 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 SOWAHCQ53LP3 525 aaPredicted RBP7.31□□□□□ -1.24
PTPRD-204ENST00000397606 C20orf196Q8IYI0 205 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 FANCMQ8IYD8 2048 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 L7N2F9 121 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 DEGS1O15121 323 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 HEXAP06865 529 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 CD3EP07766 207 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 HOXB1P14653 301 aaPredicted RBP7.31□□□□□ -1.24
PTPRD-204ENST00000397606 VAMP2P63027 116 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 GGTLC2Q14390 218 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 PLXDC2Q6UX71 529 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 KCTD9Q7L273 389 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 CENPSQ8N2Z9 138 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 OR13G1Q8NGZ3 307 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 OR6F1Q8NGZ6 308 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 IL1F10Q8WWZ1 152 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 BEX2Q9BXY8 128 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 PLK3Q9H4B4 646 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 BEX1Q9HBH7 125 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 CACNG2Q9Y698 323 aa7.31□□□□□ -1.24
PTPRD-204ENST00000397606 hCG_1809904A0A1W2PP81 198 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 A0A1W2PPE2 198 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 A0A1W2PR64 198 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 A0A1W2PRV1 198 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 TRAF3IP2O43734 574 aaPredicted RBP7.3□□□□□ -1.24
PTPRD-204ENST00000397606 HAAOP46952 286 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 PPP1CBP62140 327 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 GNG3P63215 75 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 CCDC92Q53HC0 331 aaPredicted RBP7.3□□□□□ -1.24
PTPRD-204ENST00000397606 PAN3Q58A45 887 aaKnown RBP7.3□□□□□ -1.24
PTPRD-204ENST00000397606 FNDC7Q5VTL7 733 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 HAGHLQ6PII5 290 aaPredicted RBP7.3□□□□□ -1.24
PTPRD-204ENST00000397606 OR56B2PQ8NGI1 322 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 TOMM40LQ969M1 308 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 FBXO17Q96EF6 278 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 ZNF426Q9BUY5 554 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 SRXN1Q9BYN0 137 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 CHIAQ9BZP6 476 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 COPS3Q9UNS2 423 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 RALGAPA1Q6GYQ0 2036 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 ARPC4-TTLL3A0A0A6YYG9 625 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 A0A0G2JMM0 328 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 A0A1W2PPB8 328 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 A0A1W2PRS3 328 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 KIR3DP1A8MWS1 328 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 ARHGDIBP52566 201 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 RPS4XP62701 263 aaKnown RBP7.3□□□□□ -1.24
PTPRD-204ENST00000397606 POU4F3Q15319 338 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 KCNJ8Q15842 424 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 XAF1Q6GPH4 301 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 CCBE1Q6UXH8 406 aaPredicted RBP7.3□□□□□ -1.24
PTPRD-204ENST00000397606 ELMOD2Q8IZ81 293 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 SFXN3Q9BWM7 321 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 RNF167Q9H6Y7 350 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 NLKQ9UBE8 527 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 UBE2J1Q9Y385 318 aaPredicted RBP7.3□□□□□ -1.24
PTPRD-204ENST00000397606 MEIS3P1A6NDR6 274 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 ZNF732B4DXR9 585 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 THY1P04216 161 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 CELA3AP09093 270 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 PRKACAP17612 351 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 PTBP1P26599 531 aaKnown RBP eCLIP7.3□□□□□ -1.24
PTPRD-204ENST00000397606 HLA-DMAP28067 261 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 KLF3P57682 345 aaPredicted RBP7.3□□□□□ -1.24
PTPRD-204ENST00000397606 HIKESHIQ53FT3 197 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 OR2T2Q6IF00 324 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 SLC25A26Q70HW3 274 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 COQ8AQ8NI60 647 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 POC1BQ8TC44 478 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 OR10A4Q9H209 315 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 TBCCD1Q9NVR7 557 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 C13orf42A0A1B0GVH6 325 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 A0A1W2PPH5 198 aa7.3□□□□□ -1.24
PTPRD-204ENST00000397606 CREBL2O60519 120 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms