RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 MBOAT2Q6ZWT7 520 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 SLC36A1Q7Z2H8 476 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 PNKDQ8N490 385 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 DTX3Q8N9I9 347 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 OR4F17Q8NGA8 305 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 CLPTM1LQ96KA5 538 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 OR4F4Q96R69 305 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 GPX7Q96SL4 187 aaPredicted RBP12.22□□□□□ -0.45
SEC13-206ENST00000397102 CCL13Q99616 98 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 PITX2Q99697 317 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 SSX3Q99909 188 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 SH3GL1Q99961 368 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 PARD6BQ9BYG5 372 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 FAM234AQ9H0X4 552 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 RAB18Q9NP72 206 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 MRPL15Q9P015 296 aaKnown RBP12.22□□□□□ -0.45
SEC13-206ENST00000397102 DNAJB11Q9UBS4 358 aa12.22□□□□□ -0.45
SEC13-206ENST00000397102 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.22□□□□□ -0.45
SEC13-206ENST00000397102 PRPF19Q9UMS4 504 aaKnown RBP12.22□□□□□ -0.45
SEC13-206ENST00000397102 V9GYY5 206 aaPredicted RBP12.22□□□□□ -0.45
SEC13-206ENST00000397102 J3KTA2 159 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 FBXO24O75426 580 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 KDELR2P33947 212 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 GGT2P36268 569 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 MDH1P40925 334 aaKnown RBP12.21□□□□□ -0.45
SEC13-206ENST00000397102 TPTEP56180 551 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 SELENOWP63302 87 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 LY6EQ16553 131 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 PCK2Q16822 640 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 MICBQ29980 383 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 WDR38Q5JTN6 314 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 NCR3LG1Q68D85 454 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 SLC18B1Q6NT16 456 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 CRIP3Q6Q6R5 217 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 TBPL2Q6SJ96 375 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 NDUFA11Q86Y39 141 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 OR8J3Q8NGG0 315 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 C8orf46Q8TAG6 207 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 STON2Q8WXE9 905 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 LZICQ8WZA0 190 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 TLCD1Q96CP7 247 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 R3HDM4Q96D70 268 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 TSSK2Q96PF2 358 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 DCTN5Q9BTE1 182 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 RNPEPL1Q9HAU8 725 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 C14orf119Q9NWQ9 140 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 SIGLEC7Q9Y286 467 aa12.21□□□□□ -0.45
SEC13-206ENST00000397102 IGLV1-36A0A0B4J1U3 117 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.2□□□□□ -0.46
SEC13-206ENST00000397102 GGT3PA6NGU5 568 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 DCTN6O00399 190 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 FFAR1O14842 300 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 NDUFB3O43676 98 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 PTP4A3O75365 173 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 IFNW1P05000 195 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 CDKN2AP42771 156 aaKnown RBP12.2□□□□□ -0.46
SEC13-206ENST00000397102 ELF3P78545 371 aaPredicted RBP12.2□□□□□ -0.46
SEC13-206ENST00000397102 ZNF92Q03936 586 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 TSEN54Q7Z6J9 526 aaKnown RBP12.2□□□□□ -0.46
SEC13-206ENST00000397102 LINC00346Q8IVM7 164 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 FAM216BQ8N7L0 139 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 SLC26A10Q8NG04 563 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 OR51G2Q8NGK0 314 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 SLC7A13Q8TCU3 470 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 WWC2-AS2Q96NR7 200 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 NPFFR1Q9GZQ6 430 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 PNRC2Q9NPJ4 139 aaKnown RBP12.2□□□□□ -0.46
SEC13-206ENST00000397102 TMEM5Q9Y2B1 443 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 IER3IP1Q9Y5U9 82 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 SNX13Q9Y5W8 968 aa12.2□□□□□ -0.46
SEC13-206ENST00000397102 K7EIL1 84 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 M0R135 149 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 FXYD1O00168 92 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 BHLHE40O14503 412 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 TXNDC12O95881 172 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 GRK5P34947 590 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 RPS6KA3P51812 740 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 LRRC75BQ2VPJ9 315 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 SNAI3Q3KNW1 292 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 SLC36A3Q495N2 470 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 LRRC10Q5BKY1 277 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 RRM2BQ7LG56 351 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 OR2AJ1Q8NGZ0 328 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 OR2AE1Q8NHA4 323 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 LRRC29Q8WV35 223 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 C12orf43Q96C57 262 aaKnown RBP12.19□□□□□ -0.46
SEC13-206ENST00000397102 ZNF799Q96GE5 643 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 METTL8Q9H825 291 aaKnown RBP12.19□□□□□ -0.46
SEC13-206ENST00000397102 B9D1Q9UPM9 204 aa12.19□□□□□ -0.46
SEC13-206ENST00000397102 COL7A1Q02388 2944 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 ADARB2-AS1A8MUL3 147 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.18□□□□□ -0.46
SEC13-206ENST00000397102 M0R1W7 72 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 ACOT8O14734 319 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 CD28P10747 220 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 TGM4P49221 684 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 IKZF1Q13422 519 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 AANATQ16613 207 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 RFX4Q33E94 735 aa12.18□□□□□ -0.46
SEC13-206ENST00000397102 PGBD2Q6P3X8 592 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms