RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 LRRC18Q8N456 261 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 SLC22A24Q8N4F4 322 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 IL17RDQ8NFM7 739 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 WACQ9BTA9 647 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 MROQ9BYG7 248 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 C1orf198Q9H425 327 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 MOV10Q9HCE1 1003 aaKnown RBP8.82□□□□□ -1
NEDD8-202ENST00000396828 EMC7Q9NPA0 242 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 CLEC2DQ9UHP7 191 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 CYB5R1Q9UHQ9 305 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 VSTM5A8MXK1 200 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 J3QLW9 94 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 M0R233 179 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 GPR37O15354 613 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 RGS9O75916 674 aaPredicted RBP8.81□□□□□ -1
NEDD8-202ENST00000396828 TFAP2AP05549 437 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 LCKP06239 509 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 CST2P09228 141 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 HSMCR30P0CW71 290 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 ZNF19P17023 458 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 ALOX5APP20292 161 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 PSMB9P28065 219 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 RPS27P42677 84 aaKnown RBP8.81□□□□□ -1
NEDD8-202ENST00000396828 MAGEB1P43366 347 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 EVX1P49640 407 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 DVL1P1P54792 670 aaPredicted RBP8.81□□□□□ -1
NEDD8-202ENST00000396828 MRPL28Q13084 256 aaKnown RBP8.81□□□□□ -1
NEDD8-202ENST00000396828 HNRNPA0Q13151 305 aaKnown RBP8.81□□□□□ -1
NEDD8-202ENST00000396828 TIGD6Q17RP2 521 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 SLC36A2Q495M3 483 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 CDONQ4KMG0 1287 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 SYT6Q5T7P8 510 aaPredicted RBP8.81□□□□□ -1
NEDD8-202ENST00000396828 OR2G6Q5TZ20 316 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 LIPNQ5VXI9 398 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 OTPQ5XKR4 325 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 C1orf229Q6ZS94 237 aaPredicted RBP8.81□□□□□ -1
NEDD8-202ENST00000396828 DCXRQ7Z4W1 244 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 GPR141Q7Z602 305 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 DPPA2Q7Z7J5 298 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.81□□□□□ -1
NEDD8-202ENST00000396828 LINC00346Q8IVM7 164 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 RFLNBQ8N5W9 214 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 GJC3Q8NFK1 279 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 HAVCR2Q8TDQ0 301 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 SPRYD4Q8WW59 207 aaPredicted RBP8.81□□□□□ -1
NEDD8-202ENST00000396828 GATAD2BQ8WXI9 593 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 GTF3AQ92664 365 aaKnown RBP8.81□□□□□ -1
NEDD8-202ENST00000396828 MUL1Q969V5 352 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 NABP1Q96AH0 204 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 COG8Q96MW5 612 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 SH3GL3Q99963 347 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 ABHD6Q9BV23 337 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 ZNF416Q9BWM5 594 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 OR51B6Q9H340 312 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 TRIM36Q9NQ86 728 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 BATF3Q9NR55 127 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 ZNF275Q9NSD4 429 aaPredicted RBP8.81□□□□□ -1
NEDD8-202ENST00000396828 TREM2Q9NZC2 230 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 ASH2LQ9UBL3 628 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 DUSP13Q9UII6 198 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 GNG8Q9UK08 70 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 FBXO9Q9UK97 447 aaPredicted RBP8.81□□□□□ -1
NEDD8-202ENST00000396828 IKZF2Q9UKS7 526 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 COPS3Q9UNS2 423 aa8.81□□□□□ -1
NEDD8-202ENST00000396828 METTL15A6NJ78 407 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 ZNF254O75437 659 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 RP2O75695 350 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 SULT1C4O75897 302 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 INMTO95050 263 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 AVPP01185 164 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 SCG5P05408 212 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 ERCC1P07992 297 aaPredicted RBP8.8□□□□□ -1
NEDD8-202ENST00000396828 FAM157BP0CG42 384 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 RBMXP38159 391 aaKnown RBP8.8□□□□□ -1
NEDD8-202ENST00000396828 ALDH3B2P48448 385 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 GBX2P52951 348 aaPredicted RBP8.8□□□□□ -1
NEDD8-202ENST00000396828 OR12D2P58182 307 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 TAS2R43P59537 309 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 LMO4P61968 165 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 ROM1Q03395 351 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 SCRN3Q0VDG4 424 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 MLLT11Q13015 90 aaPredicted RBP8.8□□□□□ -1
NEDD8-202ENST00000396828 ENDOGQ14249 297 aaKnown RBP8.8□□□□□ -1
NEDD8-202ENST00000396828 TAF13Q15543 124 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 TP53I3Q53FA7 332 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 TMEM255AQ5JRV8 349 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 RHOUQ7L0Q8 258 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 VASH1Q7L8A9 365 aaPredicted RBP8.8□□□□□ -1
NEDD8-202ENST00000396828 SSX6Q7RTT6 188 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 SLC16A14Q7RTX9 510 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 KRT77Q7Z794 578 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 SYT9Q86SS6 491 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 YIPF7Q8N8F6 280 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 SLAMF6Q96DU3 332 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 C4orf36Q96KX1 117 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 OR5M11Q96RB7 305 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 OR8B4Q96RC9 309 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 MGLLQ99685 303 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 ZNF649Q9BS31 505 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 TTTY10Q9BZA0 68 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms