RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 PNOCQ13519 176 aa1.9□□□□□ -2.11
CMC1-202ENST00000396610 SPIN3Q5JUX0 258 aa1.9□□□□□ -2.11
CMC1-202ENST00000396610 C16orf47Q6ZP98 133 aaPredicted RBP1.9□□□□□ -2.11
CMC1-202ENST00000396610 BZW1Q7L1Q6 419 aaKnown RBP1.9□□□□□ -2.11
CMC1-202ENST00000396610 SSX9Q7RTT3 188 aa1.9□□□□□ -2.11
CMC1-202ENST00000396610 ZNF547Q8IVP9 402 aa1.9□□□□□ -2.11
CMC1-202ENST00000396610 CCDC148Q8NFR7 591 aa1.9□□□□□ -2.11
CMC1-202ENST00000396610 GHSRQ92847 366 aa1.9□□□□□ -2.11
CMC1-202ENST00000396610 KCNS1Q96KK3 526 aa1.9□□□□□ -2.11
CMC1-202ENST00000396610 ANGPTL4Q9BY76 406 aa1.9□□□□□ -2.11
CMC1-202ENST00000396610 MRM3Q9HC36 420 aaKnown RBP1.9□□□□□ -2.11
CMC1-202ENST00000396610 CCNB1IP1Q9NPC3 277 aa1.9□□□□□ -2.11
CMC1-202ENST00000396610 ACP6Q9NPH0 428 aa1.9□□□□□ -2.11
CMC1-202ENST00000396610 C20orf96Q9NUD7 363 aaPredicted RBP1.9□□□□□ -2.11
CMC1-202ENST00000396610 PDP1Q9P0J1 537 aaPredicted RBP1.9□□□□□ -2.11
CMC1-202ENST00000396610 CLN8Q9UBY8 286 aa1.9□□□□□ -2.11
CMC1-202ENST00000396610 ZNF391Q9UJN7 358 aa1.9□□□□□ -2.11
CMC1-202ENST00000396610 COMMD3-BMI1R4GMX3 469 aa1.9□□□□□ -2.11
CMC1-202ENST00000396610 UBN2Q6ZU65 1347 aa1.9□□□□□ -2.11
CMC1-202ENST00000396610 NID2Q14112 1375 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 IGKV1-27A0A075B6S5 117 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 IGKV2-24A0A0C4DH68 120 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 M0R3G1 203 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 TNFRSF11BO00300 401 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 PSMB5P28074 263 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 PFN2P35080 140 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 POLR2IP36954 125 aaKnown RBP1.89□□□□□ -2.11
CMC1-202ENST00000396610 ZNF121P58317 390 aaPredicted RBP1.89□□□□□ -2.11
CMC1-202ENST00000396610 KRTAP12-3P60328 96 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 RPS11P62280 158 aaKnown RBP eCLIP1.89□□□□□ -2.11
CMC1-202ENST00000396610 FAM53BQ14153 422 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 TAF9Q16594 264 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 STUMQ69YW2 141 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 TMEM220Q6QAJ8 160 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 RTL4Q6ZR62 310 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 HORMAD1Q86X24 394 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 C19orf18Q8NEA5 215 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 TSEN15Q8WW01 171 aaKnown RBP1.89□□□□□ -2.11
CMC1-202ENST00000396610 BTN2A3PQ96KV6 586 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 MARVELD1Q9BSK0 173 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 SAR1BQ9Y6B6 198 aa1.89□□□□□ -2.11
CMC1-202ENST00000396610 TRIOBPQ9H2D6 2365 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 IGHV3OR16-9A0A0B4J2B5 98 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 TSPAN11A1L157 253 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 CEACAM18A8MTB9 384 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 NME4O00746 187 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 CD160O95971 181 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 HLA-HP01893 362 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 CLTAP09496 248 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 P0C880 135 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 PGA4P0DJD7 388 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 PGA3P0DJD8 388 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 PGA5P0DJD9 388 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 CTRB1P17538 263 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 USF1P22415 310 aaPredicted RBP1.88□□□□□ -2.11
CMC1-202ENST00000396610 RAB9AP51151 201 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 CMC4P56277 68 aaPredicted RBP1.88□□□□□ -2.11
CMC1-202ENST00000396610 ILKQ13418 452 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 SLC25A35Q3KQZ1 300 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 TMEM53Q6P2H8 277 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 DEGS2Q6QHC5 323 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 TMEM136Q6ZRR5 245 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 OFCC1Q8IZS5 231 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 OR52E5Q8NH55 327 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 RPEQ96AT9 228 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 HAUS1Q96CS2 278 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 SGTBQ96EQ0 304 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 C11orf70Q9BRQ4 267 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 UQCC2Q9BRT2 126 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 SHANK2-AS3Q9BTD1 123 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 NUDT9Q9BW91 350 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 ZNF442Q9H7R0 627 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 RRAGDQ9NQL2 400 aaPredicted RBP1.88□□□□□ -2.11
CMC1-202ENST00000396610 RGS18Q9NS28 235 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 ZNF586Q9NXT0 402 aa1.88□□□□□ -2.11
CMC1-202ENST00000396610 RCL1Q9Y2P8 373 aaKnown RBP1.88□□□□□ -2.11
CMC1-202ENST00000396610 TEX46H3BTG2 121 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 WRBO00258 174 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 RAD1O60671 282 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 DNAJB6O75190 326 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 CNMDO75829 334 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 GLAP06280 429 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 NTF3P20783 257 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 HTR1DP28221 377 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 RFC3P40938 356 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 TNFSF9P41273 254 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 FABP6P51161 128 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 UBE2E1P51965 193 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 UBE2MP61081 183 aaKnown RBP1.87□□□□□ -2.11
CMC1-202ENST00000396610 TRMT5Q32P41 509 aaKnown RBP1.87□□□□□ -2.11
CMC1-202ENST00000396610 ZNF829Q3KNS6 432 aaPredicted RBP1.87□□□□□ -2.11
CMC1-202ENST00000396610 KLHL12Q53G59 568 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 GCSAMLQ5JQS6 135 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 MED27Q6P2C8 311 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 LRP11Q86VZ4 500 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 ERO1BQ86YB8 467 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 STK40Q8N2I9 435 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 PQLC3Q8N755 202 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 ZNF680Q8NEM1 530 aa1.87□□□□□ -2.11
CMC1-202ENST00000396610 BPIFCQ8NFQ6 507 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms