RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 CTAG2O75638 210 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 TTRP02766 147 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 CD53P19397 219 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 RAC1P63000 192 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 SLC9A3R2Q15599 337 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 TMEM255AQ5JRV8 349 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 RNF144BQ7Z419 303 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 OR6M1Q8NGM8 313 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 SNAPC3Q92966 411 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 ELMOD3Q96FG2 381 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 NARS2Q96I59 477 aaKnown RBP14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 ST6GAL2Q96JF0 529 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 C12orf10Q9HB07 376 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 DEPPQ9NTK1 212 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 PCDHGA5Q9Y5G8 931 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 LHFPL6Q9Y693 200 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 ZNF318Q5VUA4 2279 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 A0A0B4J293 547 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 C5orf63A6NC05 138 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 ABHD16AO95870 558 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 SCGB1D2O95969 90 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 NPY4RP50391 375 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 ZFP36L1Q07352 338 aaKnown RBP14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 OR2V1Q8NHB1 315 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 RAB3CQ96E17 227 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 MNTQ99583 582 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 PINLYPA6NC86 204 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 ZNF850A8MQ14 1090 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 SLC17A2O00624 439 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 HLA-DQB1P01920 261 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 FAM157BP0CG42 384 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 AKAIN1P0CW23 69 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 SUCLG1P53597 346 aaKnown RBP14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 TSC22D1Q15714 1073 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 ST3GAL2Q16842 350 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 PHYHD1Q5SRE7 291 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 CREB3L2Q70SY1 520 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 ADGRE4PQ86SQ3 457 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 GTPBP8Q8N3Z3 284 aaPredicted RBP14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 GALNT16Q8N428 558 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 SLC22A24Q8N4F4 322 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 URM1Q9BTM9 101 aaKnown RBP14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 OR10A2Q9H208 303 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 METTL8Q9H825 291 aaKnown RBP14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 MOV10Q9HCE1 1003 aaKnown RBP14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 PRR13Q9NZ81 148 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 L7N2F9 121 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 ACHEP22303 614 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 FJX1Q86VR8 437 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 SULF2Q8IWU5 870 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 UBALD1Q8TB05 177 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 COQ3Q9NZJ6 369 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 B3GAT1Q9P2W7 334 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 CEP192Q8TEP8 1941 aa14.05□□□□□ -0.16
SMARCD1-202ENST00000394963 ZIC3O60481 467 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 TXNDC12O95881 172 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 RAF1P04049 648 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 Q0VFX4 171 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 ZNF385CQ66K41 422 aaPredicted RBP14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 LRRTM1Q86UE6 522 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 BMPERQ8N8U9 685 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 FER1L6-AS2Q96M78 137 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 FOXB1Q99853 325 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 ARL6Q9H0F7 186 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 SHANK1Q9Y566 2161 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 ZGRF1Q86YA3 2104 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 SFTPBP07988 381 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 SLC10A1Q14973 349 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 CATSPERDQ86XM0 798 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 M1APQ8TC57 530 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 GFI1Q99684 422 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 PCDHGA9Q9Y5G4 932 aaKnown RBP14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 SPG11Q96JI7 2443 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 AQP7P3A6NL99 342 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 NTN3O00634 580 aaPredicted RBP14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 HLA-AP01891 365 aaKnown RBP14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 ERCC1P07992 297 aaPredicted RBP14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 HOXC12P31275 282 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 MEOX1P50221 254 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 MMP15P51511 669 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 CHRFAM7AQ494W8 412 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 SPIN3Q5JUX0 258 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 ZNF585AQ6P3V2 769 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 ANKRD16Q6P6B7 361 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 NHLRC1Q6VVB1 395 aa14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 PRMT8Q9NR22 394 aaPredicted RBP14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 ZNF275Q9NSD4 429 aaPredicted RBP14.04□□□□□ -0.16
SMARCD1-202ENST00000394963 TEX13DA0A0J9YY54 714 aaPredicted RBP14.03□□□□□ -0.16
SMARCD1-202ENST00000394963 MTRF1O75570 445 aaKnown RBP14.03□□□□□ -0.16
SMARCD1-202ENST00000394963 PGA4P0DJD7 388 aa14.03□□□□□ -0.16
SMARCD1-202ENST00000394963 PGA3P0DJD8 388 aa14.03□□□□□ -0.16
SMARCD1-202ENST00000394963 ACTBP60709 375 aa14.03□□□□□ -0.16
SMARCD1-202ENST00000394963 ACTG1P63261 375 aa14.03□□□□□ -0.16
SMARCD1-202ENST00000394963 VHLLQ6RSH7 139 aa14.03□□□□□ -0.16
SMARCD1-202ENST00000394963 MRPL21Q7Z2W9 205 aaKnown RBP14.03□□□□□ -0.16
SMARCD1-202ENST00000394963 TMEM104Q8NE00 496 aa14.03□□□□□ -0.16
SMARCD1-202ENST00000394963 CDC6Q99741 560 aa14.03□□□□□ -0.16
SMARCD1-202ENST00000394963 OR2B2Q9GZK3 357 aa14.03□□□□□ -0.16
SMARCD1-202ENST00000394963 DMXL1Q9Y485 3027 aa14.03□□□□□ -0.16
SMARCD1-202ENST00000394963 IGHEP01854 428 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms