RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 TAAR6Q96RI8 345 aa13.06□□□□□ -0.32
CCT4-201ENST00000394440 UQCC2Q9BRT2 126 aa13.06□□□□□ -0.32
CCT4-201ENST00000394440 TPRP12270 2363 aaKnown RBP13.06□□□□□ -0.32
CCT4-201ENST00000394440 GABARAPH6UMI1 98 aa13.05□□□□□ -0.32
CCT4-201ENST00000394440 GABRA1P14867 456 aa13.05□□□□□ -0.32
CCT4-201ENST00000394440 ARSBP15848 533 aa13.05□□□□□ -0.32
CCT4-201ENST00000394440 HTR5AP47898 357 aa13.05□□□□□ -0.32
CCT4-201ENST00000394440 MRPS10P82664 201 aaKnown RBP13.05□□□□□ -0.32
CCT4-201ENST00000394440 GPR176Q14439 515 aa13.05□□□□□ -0.32
CCT4-201ENST00000394440 ST3GAL2Q16842 350 aa13.05□□□□□ -0.32
CCT4-201ENST00000394440 SNIP1Q8TAD8 396 aaKnown RBP13.05□□□□□ -0.32
CCT4-201ENST00000394440 ENKURQ8TC29 256 aa13.05□□□□□ -0.32
CCT4-201ENST00000394440 GCDHQ92947 438 aaPredicted RBP13.05□□□□□ -0.32
CCT4-201ENST00000394440 MMP28Q9H239 520 aa13.05□□□□□ -0.32
CCT4-201ENST00000394440 CNTD2Q9H8S5 307 aa13.05□□□□□ -0.32
CCT4-201ENST00000394440 RBMX2Q9Y388 322 aaKnown RBP13.05□□□□□ -0.32
CCT4-201ENST00000394440 BTCP35070 178 aa13.05□□□□□ -0.32
CCT4-201ENST00000394440 SRP9P49458 86 aaKnown RBP13.05□□□□□ -0.32
CCT4-201ENST00000394440 CHAC2Q8WUX2 184 aa13.05□□□□□ -0.32
CCT4-201ENST00000394440 PTX4Q96A99 478 aa13.05□□□□□ -0.32
CCT4-201ENST00000394440 OR10A2Q9H208 303 aa13.05□□□□□ -0.32
CCT4-201ENST00000394440 UPB1Q9UBR1 384 aa13.05□□□□□ -0.32
CCT4-201ENST00000394440 GGT3PA6NGU5 568 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 SS18L1O75177 396 aaPredicted RBP13.04□□□□□ -0.32
CCT4-201ENST00000394440 PDGFAP04085 211 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 ERCC1P07992 297 aaPredicted RBP13.04□□□□□ -0.32
CCT4-201ENST00000394440 CAPZA1P52907 286 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 RNASE12Q5GAN4 147 aaKnown RBP13.04□□□□□ -0.32
CCT4-201ENST00000394440 PABPC1L2AQ5JQF8 200 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 Q6ZS92 163 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 CDH26Q8IXH8 852 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 ZNF100Q8IYN0 542 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 C15orf40Q8WUR7 153 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 SGK3Q96BR1 496 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 ITPKCQ96DU7 683 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 GMPPAQ96IJ6 420 aaPredicted RBP13.04□□□□□ -0.32
CCT4-201ENST00000394440 SCNM1Q9BWG6 230 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 PRSS50Q9UI38 385 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 CACNG2Q9Y698 323 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 IGKV1-9A0A0C4DH69 117 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 KDM4BO94953 1096 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 ALDOBP05062 364 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 SLC6A1P30531 599 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 THBS4P35443 961 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 GDNFP39905 211 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 FAPQ12884 760 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 KLF9Q13886 244 aaPredicted RBP13.04□□□□□ -0.32
CCT4-201ENST00000394440 GUSBP1Q15486 140 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 C9orf135Q5VTT2 229 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 RNF144BQ7Z419 303 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 TOMM5Q8N4H5 51 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 OR52I2Q8NH67 350 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 C10orf35Q96D05 121 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 APC2O95996 2303 aa13.04□□□□□ -0.32
CCT4-201ENST00000394440 MAP1BP46821 2468 aaKnown RBP13.03□□□□□ -0.32
CCT4-201ENST00000394440 ZNF503-AS2A6NEH8 195 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 DHRS7CA6NNS2 312 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 ORC5O43913 435 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 ALX3O95076 343 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 OR3A2P47893 321 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 QRFPP83859 136 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 MTFR2Q6P444 385 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 FGD2Q7Z6J4 655 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 GLCCI1Q86VQ1 547 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 CPEB3Q8NE35 698 aaKnown RBP13.03□□□□□ -0.32
CCT4-201ENST00000394440 GLRX2Q9NS18 164 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 B3GNT2Q9NY97 397 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 CHD8Q9HCK8 2581 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 FAM240BA0A1B0GVZ2 78 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 TPD52L2O43399 206 aaKnown RBP13.03□□□□□ -0.32
CCT4-201ENST00000394440 PTHLHP12272 177 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 PRF1P14222 555 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 RAB6AP20340 208 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 GTF3C1Q12789 2109 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 PLA1AQ53H76 456 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 CRIP3Q6Q6R5 217 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 UTS2BQ765I0 119 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 PP6455Q8WZ26 134 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 SARAFQ96BY9 339 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 CHST5Q9GZS9 411 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 C12orf49Q9H741 205 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 RNF121Q9H920 327 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 DIABLOQ9NR28 239 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 NLKQ9UBE8 527 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 FBLN5Q9UBX5 448 aa13.03□□□□□ -0.32
CCT4-201ENST00000394440 A0A096LPE4 126 aa13.02□□□□□ -0.32
CCT4-201ENST00000394440 A0A1W2PPZ6 126 aa13.02□□□□□ -0.32
CCT4-201ENST00000394440 MTRF1O75570 445 aaKnown RBP13.02□□□□□ -0.32
CCT4-201ENST00000394440 IL18BPO95998 194 aa13.02□□□□□ -0.32
CCT4-201ENST00000394440 ZNF93P35789 620 aaPredicted RBP13.02□□□□□ -0.32
CCT4-201ENST00000394440 DYRK1AQ13627 763 aa13.02□□□□□ -0.32
CCT4-201ENST00000394440 AGAP6Q5VW22 663 aa13.02□□□□□ -0.32
CCT4-201ENST00000394440 FBXW9Q5XUX1 488 aa13.02□□□□□ -0.32
CCT4-201ENST00000394440 PLET1Q6UQ28 207 aa13.02□□□□□ -0.32
CCT4-201ENST00000394440 KRT74Q7RTS7 529 aa13.02□□□□□ -0.32
CCT4-201ENST00000394440 PAQR4Q8N4S7 273 aaPredicted RBP13.02□□□□□ -0.32
CCT4-201ENST00000394440 UPRTQ96BW1 309 aa13.02□□□□□ -0.32
CCT4-201ENST00000394440 C1orf147Q96MC9 270 aaPredicted RBP13.02□□□□□ -0.32
CCT4-201ENST00000394440 C7orf50Q9BRJ6 194 aaKnown RBP13.02□□□□□ -0.32
CCT4-201ENST00000394440 NOX3Q9HBY0 568 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms