RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 GPR107Q5VW38 600 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 OR4F3Q6IEY1 312 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 OPN5Q6U736 354 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 LRRC8AQ8IWT6 810 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 MUC15Q8N387 334 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 SLC25A45Q8N413 288 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 DRAM1Q8N682 238 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 FAM184AQ8NB25 1140 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 KCNG3Q8TAE7 436 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 THRSPQ92748 146 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 CNN2Q99439 309 aaKnown RBP-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 KRT23Q9C075 422 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 MED4Q9NPJ6 270 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 PIPOXQ9P0Z9 390 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 CES1P1Q9UKY3 287 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 TRAPPC1Q9Y5R8 145 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 HSPE1-MOB4S4R3N1 261 aa-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 LRP1Q07954 4544 aaKnown RBP-0.78□□□□□ -2.53
RNU6-239P-201ENST00000390990 IGKV3-7A0A075B6H7 116 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 IGKV2D-26A0A0A0MRZ7 120 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 IGKV3D-7A0A0C4DH55 119 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 IGKV3OR2-268A0A0C4DH90 116 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 FNDC10F2Z333 226 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 TRGV3P03979 118 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 ARG1P05089 322 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 CD70P32970 193 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 MERTKQ12866 999 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 MRPL28Q13084 256 aaKnown RBP-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 PDZK1IP1Q13113 114 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 OR7A5Q15622 319 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 TATDN3Q17R31 274 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 KRTAP6-1Q3LI64 71 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 HSP90AA5PQ58FG0 334 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 TMEM41BQ5BJD5 291 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 C16orf87Q6PH81 154 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 PDIK1LQ8N165 341 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 C10orf126Q8N4M7 172 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 NKAIN3Q8N8D7 197 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 ANKFN1Q8N957 763 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 B9D2Q9BPU9 175 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 NMRAL1Q9HBL8 299 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 DOK5Q9P104 306 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 STX18Q9P2W9 335 aaKnown RBP-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 GOLT1BQ9Y3E0 138 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 MFHAS1Q9Y4C4 1052 aa-0.79□□□□□ -2.54
RNU6-239P-201ENST00000390990 TNCP24821 2201 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 LOC102724200A0A096LPH7 203 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 BTBD17A6NE02 478 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 LRRIQ3A6PVS8 624 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 PDZK1P1A8MUH7 402 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 DYNC1I1O14576 645 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 PPP1R2P9O14990 202 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 RPA2P15927 270 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 U2AF2P26368 475 aaKnown RBP eCLIP-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 FAM133BQ5BKY9 247 aaKnown RBP-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 ANKRD26P1Q6NSI1 321 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 CD300LGQ6UXG3 332 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 UNQ6190/PRO20217Q6UXQ8 127 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 CYHR1Q6ZMK1 362 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 COA5Q86WW8 74 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 CENPLQ8N0S6 344 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 C3orf22Q8N5N4 141 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 SPC24Q8NBT2 197 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 BPIFB6Q8NFQ5 453 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 OR2A1Q8NGT9 310 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 ENKURQ8TC29 256 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 SCFD1Q8WVM8 642 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 PLEKHA8Q96JA3 519 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 PKNOX2Q96KN3 472 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 MICU1Q9BPX6 476 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 KCNS3Q9BQ31 491 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 NUP50Q9UKX7 468 aa-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 MRPS16Q9Y3D3 137 aaKnown RBP-0.8□□□□□ -2.54
RNU6-239P-201ENST00000390990 CACNA1BQ00975 2339 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 LCTP09848 1927 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 SPAG9O60271 1321 aaKnown RBP-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 PCDH11XQ9BZA7 1347 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 METTL21EPA6NDL7 271 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 ZNF729A6NN14 1252 aaPredicted RBP-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 C17orf98A8MV24 154 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 F8WDY8 70 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 M0R1X1 148 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 SCGB2A1O75556 95 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 CLIC3O95833 236 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 CALCBP10092 127 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 SSR4P51571 173 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 NDUFA8P51970 172 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 YWHAGP61981 247 aaKnown RBP eCLIP-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 RPS15AP62244 130 aaKnown RBP-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 ZNF266Q14584 549 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 ZNF726P1Q15940 193 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 TPRXLQ17RH7 258 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 SLC36A3Q495N2 470 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 PYCR3Q53H96 274 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 PDZK1Q5T2W1 519 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 RTL4Q6ZR62 310 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 RBM43Q6ZSC3 357 aaKnown RBP-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 TICAM2Q86XR7 235 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 HS3ST5Q8IZT8 346 aa-0.81□□□□□ -2.54
RNU6-239P-201ENST00000390990 OR51F2Q8NH61 342 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms