RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 PCM1Q15154 2024 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 IGKV1-27A0A075B6S5 117 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 IGHV3OR16-8A0A075B7F1 116 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 IGKV3D-11A0A0A0MRZ8 115 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 IGHV1-3A0A0C4DH29 117 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 A0A1B0GUH1 482 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 BTNL10A8MVZ5 291 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 MANBAO00462 879 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 DNALI1O14645 258 aaPredicted RBP0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 BCKDKO14874 412 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 NMT2O60551 498 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 RAD1O60671 282 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 GATBO75879 557 aaKnown RBP0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 HLA-HP01893 362 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 PGA4P0DJD7 388 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 PGA3P0DJD8 388 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 PGA5P0DJD9 388 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 TCP1P17987 556 aaKnown RBP0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 RAB4AP20338 218 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 RAB5AP20339 215 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 PFN2P35080 140 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 MPV17P39210 176 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 MYCNOSP40205 109 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 RFC3P40938 356 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 GDI2P50395 445 aaKnown RBP0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 SERPINB8P50452 374 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 RAB7AP51149 207 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 NDUFA8P51970 172 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 AP1S2P56377 157 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 BEX3Q00994 111 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 FLI1Q01543 452 aaPredicted RBP0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 KDSRQ06136 332 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 NAB1Q13506 487 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 IL18Q14116 193 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 TRMT5Q32P41 509 aaKnown RBP0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 ZNF829Q3KNS6 432 aaPredicted RBP0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 SLC25A35Q3KQZ1 300 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 BEX5Q5H9J7 111 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 TMEM53Q6P2H8 277 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 OPN5Q6U736 354 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 SPINT4Q6UDR6 99 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 WDR82Q6UXN9 313 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 CASP12Q6UXS9 341 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 TMPRSS11AQ6ZMR5 421 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 RTL4Q6ZR62 310 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 ERO1BQ86YB8 467 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 MICU2Q8IYU8 434 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 VKORC1L1Q8N0U8 176 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 C19orf18Q8NEA5 215 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 BPIFCQ8NFQ6 507 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 OR56A4Q8NGH8 313 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 OR1P1Q8NH06 330 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 KLF14Q8TD94 323 aaPredicted RBP0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 RXFP4Q8TDU9 374 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 RERGQ96A58 199 aaPredicted RBP0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 RPEQ96AT9 228 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 JSRP1Q96MG2 331 aaPredicted RBP0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 C18orf15Q96N68 181 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 OPALINQ96PE5 141 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 MYCBPQ99417 103 aaPredicted RBP0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 BPIFA3Q9BQP9 254 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 C11orf70Q9BRQ4 267 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 ZSCAN16Q9H4T2 348 aaPredicted RBP0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 EXO5Q9H790 373 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 RGS18Q9NS28 235 aa0.84□□□□□ -2.27
RNU6-440P-201ENST00000390882 BRCA1P38398 1863 aaKnown RBP0.84□□□□□ -2.28
RNU6-440P-201ENST00000390882 IGKV2-24A0A0C4DH68 120 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 A0A1W2PRD5 423 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 ZNF233A6NK53 670 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 C16orf90A8MZG2 172 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 ANKRD65E5RJM6 399 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 WRBO00258 174 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 GABRPO00591 440 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 CASQ2O14958 399 aaPredicted RBP0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 ERI3O43414 337 aaKnown RBP0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 XRCC2O43543 280 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 SERPINB7O75635 380 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 FCN3O75636 299 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 LHBP01229 141 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 RPN2P04844 631 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 IFNW1P05000 195 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 ASGR1P07306 291 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 CD34P28906 385 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 CD70P32970 193 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 BMI1P35226 326 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 TGFBR1P36897 503 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 SLC1A2P43004 574 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 PPICP45877 212 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 IDH2P48735 452 aaKnown RBP0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 FABP6P51161 128 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 UBE2MP61081 183 aaKnown RBP0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 RPS11P62280 158 aaKnown RBP eCLIP0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 RBX1P62877 108 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 IFITM3Q01628 133 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 RAD51Q06609 339 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 CUL2Q13617 745 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 TFDP2Q14188 446 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 DMC1Q14565 340 aa0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 MAD2L1BPQ15013 274 aaPredicted RBP0.83□□□□□ -2.28
RNU6-440P-201ENST00000390882 MFSD14CQ5VZR4 134 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms