RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 USF3Q68DE3 2245 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 FBXO42Q6P3S6 717 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 ULK3Q6PHR2 472 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 CLEC18BQ6UXF7 455 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 VITQ6UXI7 678 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 Q7L0L9 218 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 PRSS41Q7RTY9 318 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 DPY19L4Q7Z388 723 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 TRAPPC6BQ86SZ2 158 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 ZNF584Q8IVC4 421 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 WDFY1Q8IWB7 410 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 SFTPA1Q8IWL2 248 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 C9orf40Q8IXQ3 194 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 ZNF679Q8IYX0 411 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 CDK20Q8IZL9 346 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 OR5AS1Q8N127 324 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 PRR18Q8N4B5 295 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 FAM24BQ8N5W8 94 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 CSNK1A1LQ8N752 337 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 ZNF676Q8N7Q3 588 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 FRMD1Q8N878 549 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 DTWD2Q8NBA8 298 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 INO80EQ8NBZ0 244 aaPredicted RBP3.06□□□□□ -1.92
TRAV39-201ENST00000390466 ACBD4Q8NC06 268 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 ELOA3Q8NG57 546 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 OR10H5Q8NGA6 315 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 OR4N2Q8NGD1 307 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 OR1J1Q8NGS3 322 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 OR6N2Q8NGY6 317 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 OR5R1Q8NH85 324 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 MARCH1Q8TCQ1 289 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 RNASEH2CQ8TDP1 164 aaKnown RBP3.06□□□□□ -1.92
TRAV39-201ENST00000390466 ST7LQ8TDW4 575 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 ABHD5Q8WTS1 349 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 Q8WTZ3 238 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 MR1Q95460 341 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 ERGIC1Q969X5 290 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 FAM131CQ96AQ9 280 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 RAB3CQ96E17 227 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 MISP3Q96FF7 219 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 MEGF10Q96KG7 1140 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 C5orf34Q96MH7 638 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 SERINC2Q96SA4 455 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 INTS14Q96SY0 518 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 PFDN5Q99471 154 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 CDCA3Q99618 268 aaPredicted RBP3.06□□□□□ -1.92
TRAV39-201ENST00000390466 SULT4A1Q9BR01 284 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 GINS3Q9BRX5 216 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 RAB11FIP5Q9BXF6 653 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 CNTNAP3Q9BZ76 1288 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 MRPL37Q9BZE1 423 aaKnown RBP3.06□□□□□ -1.92
TRAV39-201ENST00000390466 RAB33BQ9H082 229 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 COMMD4Q9H0A8 199 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 ZBP1Q9H171 429 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 LPAR5Q9H1C0 372 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 SYT4Q9H2B2 425 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 SMOC1Q9H4F8 434 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 C8orf33Q9H7E9 229 aaPredicted RBP3.06□□□□□ -1.92
TRAV39-201ENST00000390466 ZMAT3Q9HA38 289 aaKnown RBP3.06□□□□□ -1.92
TRAV39-201ENST00000390466 ELOVL3Q9HB03 270 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 CDH20Q9HBT6 801 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 SPACA1Q9HBV2 294 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 MKKSQ9NPJ1 570 aaPredicted RBP3.06□□□□□ -1.92
TRAV39-201ENST00000390466 RPS10P5Q9NQ39 176 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 MBNL1Q9NR56 388 aaKnown RBP3.06□□□□□ -1.92
TRAV39-201ENST00000390466 DECR2Q9NUI1 292 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 PRR13Q9NZ81 148 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 VSX1Q9NZR4 365 aaPredicted RBP3.06□□□□□ -1.92
TRAV39-201ENST00000390466 CXXC1Q9P0U4 656 aaPredicted RBP3.06□□□□□ -1.92
TRAV39-201ENST00000390466 PPP4R1LQ9P1A2 415 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 KLHL13Q9P2N7 655 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 PISDQ9UG56 409 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 TMED3Q9Y3Q3 217 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 ZNF780BQ9Y6R6 833 aa3.06□□□□□ -1.92
TRAV39-201ENST00000390466 MED12LQ86YW9 2145 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 TET2Q6N021 2002 aaPredicted RBP3.05□□□□□ -1.92
TRAV39-201ENST00000390466 IGKV1D-8A0A087WSZ0 117 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 ELOA3CA0A087WX78 387 aaPredicted RBP3.05□□□□□ -1.92
TRAV39-201ENST00000390466 EDDM13A0A1B0GTR0 161 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 TMEM269A0A1B0GVZ9 245 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 LOC107986453A0A1B0GWG9 222 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 A0A1W2PQ45 241 aaPredicted RBP3.05□□□□□ -1.92
TRAV39-201ENST00000390466 A0A1W2PQY0 241 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 MEGF11A6BM72 1044 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 BTBD17A6NE02 478 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 TLCD2A6NGC4 264 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 SERINC4A6NH21 518 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 ZNF726A6NNF4 738 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 A8MWP6 167 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 C10orf142B7Z368 130 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 C9J4A7 227 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 UMAD1C9J7I0 102 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 HRKO00198 91 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 SOX1O00570 391 aaPredicted RBP3.05□□□□□ -1.92
TRAV39-201ENST00000390466 CLDN4O14493 209 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 HSD17B6O14756 317 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 AGPAT2O15120 278 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 RRP8O43159 456 aaKnown RBP3.05□□□□□ -1.92
TRAV39-201ENST00000390466 LATO43561 262 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 ZNF354AO60765 605 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms